ndufa10 (ndufa10,LOC107684997,LOC107567779)


Basic Information

Item Value
gene id ndufa10
gene name ndufa10,LOC107684997,LOC107567779
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13456115 ~ 13460454 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249747.1
GCTGACGCAAAAAAACCGCGACGCGACTCAGAGATCGCTCGACGACATTGAGGATCGTCAGACTCACCGGAGTTTGTGAAGTTTCGCGATGGCGTTGCGGTTTATTCGGGTAGTTGTGCCATCGGGCAGAGCAGCTTGGAAAGCCGCATCGCCCGTGGCGACGGCTCAAATTCACACAAGCGCTGTCAGTAACCTGAGGTATGGATGGTGGACTTATGTTCTGGGGGAGAGGACCACCTCCCGCTTCAAGGAAAACAGCAAGATTATTTCCATTGATGGCAACTTGGCGTCTGGAAAAGGTGCACTTGCACAACAATTGGCAGATAAACTGGGAATGCTGTACATGCCTGAGCCAGACACGCACTACATGGACACAGTGACAAAGGAGAAAGTTCCCCTAGATGACGCTTTTAATGGAAACTGCAGTCTGGAGAGGTTTTACTTGGAGCCGAAAGCAAGTGACGGTCACTCTTACCGCTTGCAGTCTTGGATGTACCTCATGAGGCTGCTGCAGTACTGTAAAGCTTTCGAACACCTGCTCTCTACAGGACAGGGAGTTATTCTGGAACGCTCTCCGTTTAGTGACTTTGTGTTTTTGGAGGCCATGGTCAAAGAAGGGTTCATCAGAAAGCAGTGTGTGGATCACTATAATGAGATTAAAGGTATCAGTATCTGTGAGTTTCTGCCCCCTCATCTGGTCATCTATGTGGATGTACCTGCTGAAGAGGTCCAGAAAAATCTCAAGGCATCAGGAAAGTCATACCTCCAGAATGTTCCTTTATCGTACCTGAAGAATATTGAGACAGCATACAAGGCCAACTTCCTTCCTAAAATCAGTGAAGAGGCAGAGGTTCTTTCCTATGATGCAACCCAAGCCCAGGACATTGAGAAGattttgGAGGATATTGAGTACCTCAAGTTTGACAAGGGCCCTTGGCTGGAGCAAGATGACGTCAGTTTCCACCATATACGAATGTTCGTGGAGGCTAAGCAAACAGTTGCCAACCTGACCTGTATACCCAGATACCTTCCAGAAATCACAATCGGTGCTCACGAGATTGATGCTTCCTACTATGCTTTCAAATCGCTCCCAGGAAAGATGTATAGTGAAGGTTATAATGAAGACGTCGGGGACAAAGACATCTGGCTGAAGTGAGAAACGCTGTCGTCGCTGGAGGGAAGGACGTCTGAAAGACGGATTCCTTGTGGTATTTCAACCATTTGTCCATGTCTTATGGGGAAATATATATTCTGCTCTTATGCAACTAAAGATATCATTGTACATTGCTATTAAAACAgttgtatgttaaaaaaaaa

Function

symbol description
ndufa10 Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial matrix and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Predicted to be active in cytoplasm. Is expressed in several structures, including alar plate midbrain region; gut; immature eye; myotome; and nervous system. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 22. Orthologous to human NDUFA10 (NADH:ubiquinone oxidoreductase subunit A10).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function

KEGG:

id description
K03954 NDUFA10; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249747.1 True 1317 mRNA 0.46 10 13456115 13460454

Neighbor

gene id symbol gene type direction distance location
parp9 NA coding upstream 6516 13444255 ~ 13449599 (+)
esyt3 esyt3,LOC107685117,LOC107723684,LOC107695576,LOC107555067,LOC107725232 coding upstream 22131 13425190 ~ 13433984 (+)
trnal-caa NA coding upstream 32289 13423714 ~ 13423826 (+)
wdfy2 wdfy2,LOC107725248,LOC107685482,LOC107723695,LOC107695578 coding upstream 36264 13411787 ~ 13419851 (+)
serpine3 serpine3,LOC107555035,LOC107567776,LOC107725220,LOC107695567 coding upstream 56003 13386660 ~ 13400112 (+)
sh3bp4 sh3bp4,LOC107684539,LOC107555364,LOC107723680,LOC107658300,LOC107555062 coding downstream 148973 13609427 ~ 13622795 (+)
arl4cb arl4cb,arl4c,LOC107658299 coding downstream 164022 13624476 ~ 13626143 (+)
acmsd acmsd,LOC107723660,LOC107555338,LOC107725255,LOC107555032 coding downstream 211213 13671667 ~ 13675943 (+)
kif5c kif5c,LOC107723658,LOC107684119,LOC107555329,LOC108425929,LOC108266089 coding downstream 235349 13695803 ~ 13713322 (+)
lypd6b lypd6b,LOC107725258,LOC107658295,LOC107683936,LOC107723697,LOC107555360 coding downstream 253317 13713771 ~ 13728818 (+)
G69796 stk17b non-coding upstream 322276 13130098 ~ 13133839 (+)
G69789 NA non-coding upstream 348283 13107595 ~ 13107832 (+)
G69783 NA non-coding upstream 349358 13106280 ~ 13106757 (+)
G69723 NA non-coding upstream 615964 12837719 ~ 12840151 (+)
G69718 NA non-coding upstream 682265 12773334 ~ 12773850 (+)
G69985 NA non-coding downstream 55235 13515689 ~ 13518237 (+)
G70021 NA non-coding downstream 208652 13669106 ~ 13669444 (+)
G70029 map3k19,LOC107684057,LOC107723646,LOC107555330,LOC107725236,LOC107658294 non-coding downstream 225342 13685796 ~ 13686466 (+)
LOC122351436 LOC107555330 non-coding downstream 226211 13686665 ~ 13689033 (+)
G70032 NA non-coding downstream 231760 13692214 ~ 13692487 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 151524 13289693 ~ 13304591 (+)
G69755 NA other upstream 470137 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 652707 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 826580 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 1003750 12434988 ~ 12452365 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 215709 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1126628 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 1940673 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 2247747 15708201 ~ 15715901 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 2274116 15734570 ~ 15789702 (+)

Expression


Co-expression Network