LOC122352171 (fam155a,LOC107716804,LOC107721616,LOC107570097,LOC107702989,LOC107688721,LOC101886421,LOC107735187)


Basic Information

Item Value
gene id LOC122352171
gene name fam155a,LOC107716804,LOC107721616,LOC107570097,LOC107702989,LOC107688721,LOC101886421,LOC107735187
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6501409 ~ 6599198 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249750.1
ATGTCTCTCCTGTGCCCGGCTCCTTACACACAGTTACACGCTGCATACTAATAAACTTCAGCCTGAACTGGATGAACGAGACATACAAATGTCGTTTCATCTCTGTCACACGCTGATTCTCCTTCACGCAACATGTTGCGATATCCTTTTCCTCTCGTCTTTGCGCATTTAAAGGACATTACGCACCGCCAAAACGATGCCATTTAACGCCACAGCGTCTTTAAACGTCCACACTGCGTCTTTTATTCTGCTCGGAGCTCGTAGAAAGGATCGCTTTTGACGGGAACGTGACGGGATGCTGAAGATGAGCGGACTATGAATACGGACAAGAGGAAGGACAAGGGGGCGAACGGCTTTGAAATCTAAACGCGTACGGggaaatgtgcatttattatgggTGATCTCTCATATTGAAACGTCCagtgagtgtgcgtgcgtgcgtgtgtgtatgtgtgtgtgtgtgtgtgtgagagagtgcgggtgcgcgcgcgcgcgtatATCCATCGCCTGTAGTCTGTAGATCTGTGTTACTGCGCCAGGATGGAGATGACGCAAATGACCCAGCTCCCCAAAAAGTGTTTCAAGACGAACATGGCGGCAACTTAACACAGGACccaagatgatgatgatgatgatgaacagCAGAGAAGATCGAATGCAATCCGCCCAGATAGGGAAAGAGCAGCTCGTTCAGCGTCTCGCCTTCCCTTGAGGAGATACGGGAACAGAGGAGGCATGTTGTCACACAGAAAGCGCTTTTTCTCCGGGGAGCCATGCGGAATAACGGAGATATGACCGCGCGCGGCTTCATCTAGCCCAGAGAGTCGGACACAGCTGCCGGGAGCGCTGTTGAACGggaagaaaacatttcaaatcaatgcattttGTGGCAGAGGAGCCGTCGCGGTGGAGTCGGCTAGTGCTGCTCTTTCCTGAAATATGACCAGGGGTGCTTGGACGTGTCGGCAGCAAGATGACGGCTTAAAAATCTGCTTCGCACCCCGAGAGGACGAAAAGCCATTATTCACCGATTCGGAAAGGGCCCAGAGATGGCGACTGTCCTTAGCCTCTCTTTTGTTTATCACCGTTTTGCTCTCTGATCATCTGTGGTTCTGCGCCGAGGCGAAACTGACGAGGACGCGAGACAAACGGCTGGAGCACACGAACCATATACTTTCATCCAGCCATCAGAGAGAGCAGAGTCTTATTTTTATAGGCAATTCTACCAAACCTCTGTGGAGACTTGAAACTTGTCATCCTGACAGCCTCTCCAAAAACTGCTTGACTTTTGACGAGGCGGAAGCCGTGTGCTCGGGCCTCTCCGAGTGGAACCTGAGCgatttctatctttctttttgtaACTCCTACTCGCTTTTGGATTTGTTTTACGGGTTTACGAGTCCGGACAATTTGACCTGTAGCCTGGACATGGCTGATGCGTCGGGATGCAGCCAGTGCGTCCAGGCTTACCAACGCTACGACCGACGAGCTCAGGAGAAATACCGAGAGTTTGAGCTTTTGGTTCAGAAATATGAAACGGATGTATATTCGGTGCGGACGTGTATGGAAGAGTGCACGACTGTCTACAAACACTGGCTCTGTGCCCAGTTCTTCCACACCACACAGATGCACTGCAGCAACAGGATCCCCTGCAGGAAGTACTGCCTGGAGGTCCAGCAGAGGTGTCCCTTCATATTGCCTGACAATGATGAGCTCATCTACGGAGGAAGCCCCAGTTTTATATGCACAGGGCTCCAAGAGGACAACCCCTCAGACGCAGAGACAGAGTGCTGCGATGTCCGATGGGACAGCAGGGCGGACAACAGCTCCAAAGGCACTCTCAAAAGAACTCACCCGTCGTGTCAGCACGGGACATCCCTGACCTCGTCAGCGGCCTCTAGACTGTGCAACAGCAGACTCAAACTCTGCTTGCTGGTCCTCGTCCTCCTTCATACTGTTGCCACTCTCACAGCATCCCACAATCCCACCGGGTTCAACCTCACCTCCAGCTCCTCCAACGAGGAATGACGGAATAGCCACTCGGTTACAGTGGCGATTCCAGCGACGTGACGGACCGTGGGCAACTTGCTGGGACCTCTGATACAGAGACTGTGGACATGCAATCAAAACAAACCAAGCAAACTGACGAAGCTAAACAAACACTGGACGAATCCAATCAAGCAACAAGAACAAGGGACAACACCGTAGCCTTTGTTGAAAGAGACTTCTAGGGGGCGGAGTTCTCTCGCACCATGTTTTTTACACTGTGTCTATGGTTTGGATTTCTGTTGCACTAGATGACTACAGGATCTAATTCacgtttcttttttgtttcatttgggTCTTTGTGCAGGAAGGATTGGAAGAGACGGATGAGTTAAATGTACAGTATCCAAGTGAATATTCAAGACTGAGCGCGTGTCTATGTGAGCGAATGAACGAgagcgtgtgcatgtgtgcctGTGCTTGCATCCGTGTGTCCACTTAGATGTTCTTCTCGTTTCTCTTCGTAATCACAAACTCTCTGAATGCTGCTCTATTCATTACGAGGGTTTCTATTGTCGTTTATCCGCTGACAAATCTGCCTAGACAAATACCAAGAcacccaaaaaaaaacccaggtTCAAACTCTCCCGTTAAGATCCTGTAACCTTATTAAGGTAGCCTGATATTTCTGTTGTTGgtatgatgtcatttcctgtgagGTCAGGTCAGTAGCTTTGGGGGTCTGGGTACATTAATGTCGCTTATTCACGTAAGTGCTCGACTGAAAGGTCTAGGTATCCAGACTTCTGTTTGTTCCCTCGGTCTGCGAAAAGACGTCCACAAATCTGTTTTTAGCTCCATtcgtgttttatatattatagtaagATATTATATTCTCTACCCTATATTCTGTAATTGCATGTTAGAACCAGTTTAGACAATGCTGCtaaagttttaaagaaataaacccAAACGATCGGAAAACAAGAGGAACTCTCGCTCCGAGTACCATCCAAATTGCTATCTGGCAGCATGAacccagccaatcagagcttACCAGACAAATTACCCCAATCGCACAGAGAGGATCCATCGTTCTTTATTACAGTAAAGGGCTTACCCATCATCCACACGCAATCAAACACTCCTGCATGTAGAGATTCACGTGGCATGAATAACTCAGTGAAAACAATGTTAATTTGTTGCAAACCTTGAGATAGTCATGTCGACAGGAAGTTGAGGAGCTCCAGATAGAAGAGCGAAGGCCCGTTTCAGGTGGCTGGGCTGAAGAAACCGGTTCGTTGTGTTAAGAAGGGGATAAGTTAAGGGctgatgtattattttatgttatttttttctacaggTATGCTCTAATGAGGATGTGTCACtgtgacacaaacacaaaacaaagccTTGAGTTTAACTAAGTTCTCTAGACAGCCTCAGTGCGAGCCTGTTGAAATAGCAGTCCTCGCACCCGTGTTTCCATCTCATAGGACATGACTAATAGCGGTTAATGTTAGGTACGCATACATATGTCATATATCGGGCACGGCTAGCTTTGAGGCTAGGTAAGCTaactgaaaaaagaagaagtgtTTTGTAGCCATATTTCAATTGTGTAAAGCAGGCTAACATAGCGCATGTCATACGCACtcatttcatgtaattttattcCTTTCCTGTACATATCTGTAGATTGTCTGCATTAAGGTGCGGTCACATTTACGTTGTGCAGTCAGTTAGCCGAGTCTGGAATCGCGCATGAAGAGAAACTTTTTTCCAAATGCAAAATTTGTGTCAGATTCAGGTTTGATAACATTTGAGTGTAAGTTCGTAGTCAATTTCGCATCGCTTTCAGATTTCACAACTTTGGATGTGCAAATCCATCGCAAAATTTCGTATCGAATTTCGAAACATCGCAATTCATCGCATTTACCAGTATTCAGCTGCCTATATTGGAAATTCGCTTAAGTTTGCCAATGTGACCAAGCCTTTAAACTACATTggaaaaaagctgatttttttctcaatgcGTATTATCATCACATGCAATACCATTAAACTAAAGGCAAATTTAATAACTTGGATTTTAAGAGAACAAATCAATCCATTTGCCCTTTTGCTGTTTAAACTACCATTAGCGGTGACCTTTTGAGGTGTCAGAAGCACAaagcgtttttttgttttctgaaattgACTGCTGATGCAGTTCAGttcagctgatttaaaaaaagcatttaaccCGAACGCCCAAATGCTGGGAGAGAAACTACTTTTATTCCACTGTTTTTAAATTTCagaattttcaaataaaaatagtcaaacagCTAATTCTTGGCTGTGCAGGGTTTTTGAATTTGGGCAAGCTGAGGTTTATCAAACATCTGataataatgacttttaataTCCCTACCTATAAATCTCTGACTTACTGCCTGTAGGCCCATCTTGGCATTTCATTAAACCAATATGTTACCAGAAACACCGTAACTAGTTCTACAGGTACACAGTACTATGCATGATATGGAATTTTGACCATATGGCAAGGCCCATTTGAGATGTATAAGGGCAGTCCGGCTTGCTGTGCTGAGGACTTTGCTAATGAATAATTAGAGGGGAGTACTGAGAGATACAGTATACCCTCTCGAGAGCTTATTAGTTGGTTTATAACCCTGGACATTCAGCTCGGACCACCTGCTCTGGAATAGCAGGCAGATCAGAAATGATTCCCTCTGTTCATCTCCAAACAAAACTAATTCTGTCTCTCCAGCTGGGCCTGACGGTGAAGGAAAAGATGAGTTAGAGAGAGATGGGCTAATGACAGCAACATATTATTCATTTGCTCTGAAGTTCTGGATGTTTGTTACAGCAAGAcgagcatgcacacacaccgtaatacacacatgcatacatgcttACCCTTTGTATATATTTGGCGACGCTCTACAAGTCAGGAAGGATTCGAGTTGCCTCATTTTCAACACTCATGTCAAAAAAGTCATTCGGTTTGCCTGGTATAAATTTGGACTAAAGCATTGAATCGGTCACCAAACGTACTTCGAGCGCCGCCATTCACAACAGTGCTGACTAAAACGTATACCTAAACTGAGAGCAGCGTCGTGGTTGCTCAGATTTGTCACATTTGTAAAcatgtttctctgtgtttgttGGGATTCAATCACCATACAGTTTGTCTCAGCGACCAACGAGATTGAATGTAACAGATGCCTGCTAATATCGCTAAACACCACCAAACCTACTATAAGATGTATTTTATGCTTGCACATGTTTTATGGTCATTTCCAAGTACTGATCCAGTTGTGTAAGTAGTATTCCACACTGCGTAATCACTTAGCAAGCAGAAATACTTTCTTTTCTGAATCCTGTGGACCTATGCAGCCCTCGACCTcagttgtttttctgttgtaaATACGTTACGAGAATGCTAAACaatgtgtgtctctgtttgATTTGGAGGTTTCCTTGTGTTCTGAGTTGGTGTCCTTTTTTAAATCCTCTTTTGTAAGTGTCAGAGATCATTGGTTGGTTTGTGCTGAGATGGATACTGAGAGCGGAGTGGTTTCATCACAAGAACTGTCCTCTTGGTCACAACCTCGGCACCTGAAGGCTGTGATGCTGTTTGTGATGGTATGTGCAAAGCAATGACTTTAAGAAAATATGAGAAAGGTTTAAAGGCATATAGAGATAACATTATGACTATGactactggaaaaaaaaaataatattatatactaccggtatattgtaatattatagaTGATTTAGTTCAGTAacctatttaatttttttacaagcaactttgatgaaataatttataaaacaatCTCACAAGTTATGATCTTTTCGAAGGTATGATTATACTGCTAAAATGATTAAAGTtgtgttctgatgaaaaaacaaa

Function

symbol description
fam155a Predicted to contribute to stretch-activated, cation-selective, calcium channel activity. Predicted to be involved in calcium ion import across plasma membrane. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human NALF1 (NALCN channel auxiliary factor 1).

NR:

description
PREDICTED: transmembrane protein FAM155A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249750.1 True 5911 mRNA 0.44 3 6501409 6599198

Neighbor

gene id symbol gene type direction distance location
abhd13 abhd13,LOC107570096,LOC107702974,LOC107688719,LOC107551070 coding downstream 3205 6492609 ~ 6498204 (-)
tnfsf13b tnfsf13b,LOC107702981,LOC107688720,LOC107721586 coding downstream 9053 6487238 ~ 6492356 (-)
myo16 myo16,LOC107716764,LOC107688718 coding downstream 23863 6319090 ~ 6477546 (-)
LOC122351467 abi2,LOC107738105,LOC107752895 coding downstream 402605 6088469 ~ 6098804 (-)
LOC122351466 LOC107670336,LOC107720941 coding downstream 414390 6069745 ~ 6087019 (-)
LOC122351204 LOC107716777,LOC107688771,LOC100331465,LOC107602892,LOC107702999 coding upstream 87020 6686218 ~ 6708208 (-)
si:ch73-390b10.2 si:ch73-390b10.2,LOC107688773,LOC107551072,LOC107692818,LOC108266990 coding upstream 120556 6719754 ~ 6726798 (-)
tmtops2b tmtops2b,LOC107602912,LOC107688724,LOC107716802,LOC107721599,LOC106586769 coding upstream 208131 6807329 ~ 6832254 (-)
ecrg4a ecrg4a,LOC107602890,LOC107688728,LOC107716776,LOC107721563 coding upstream 284290 6883488 ~ 6888374 (-)
nck2a nck2a,LOC107602910,LOC107688727,LOC107721610,LOC107676443,LOC107551075,LOC107716798 coding upstream 297279 6896477 ~ 6943442 (-)
G68189 NA non-coding downstream 259807 6241322 ~ 6241602 (-)
LOC122351301 NA non-coding downstream 358727 6117851 ~ 6142682 (-)
G68120 dip2a non-coding downstream 453813 6045115 ~ 6047596 (-)
G68082 NA non-coding downstream 695082 5805940 ~ 5806327 (-)
G68055 NA non-coding downstream 765626 5735337 ~ 5735783 (-)
G68265 NA non-coding upstream 80897 6680095 ~ 6683011 (-)
G68266 NA non-coding upstream 98488 6697686 ~ 6697893 (-)
G68270 LOC107716762,LOC107688772,LOC107602882,LOC107721583 non-coding upstream 116798 6715996 ~ 6718143 (-)
LOC122351577 NA non-coding upstream 175876 6775074 ~ 6776974 (-)
G68333 LOC107721598,LOC107716800,LOC107688722,LOC107579700 non-coding upstream 194204 6793402 ~ 6794375 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 240340 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 401497 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 457484 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 570273 5912855 ~ 5931136 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 1101529 5396865 ~ 5399880 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other upstream 471787 7070985 ~ 7153954 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 1415251 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 1477270 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 3308990 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 3834309 10433507 ~ 10443619 (-)

Expression


Co-expression Network