LOC122351247


Basic Information

Item Value
gene id LOC122351247
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 25744021 ~ 25750389 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251714.1
GCTAAACAACACTGTTCATGACCTTCTATACGGGATCAGTTTATGGCCGGAGTTGTTTATAAatggCCAGACAGTCAAGTTTCGATTGGCCTCTGGTGGGCAGGATAACAGACTGAGGATATGGAttatttcccagcatgcagcAGCAGGAAGGAAGTCACTGGGTTACTCCAGAACGCTGGTCAGTGATTGGTCAGTGGTGGACACGTTTAGGACCCACAACATCGACGGGGCCGAGCTCATCAACTTAAACACAGAGACCCTGAGCACCGAGTTTAAGATCGGTGAGGAAACACACTCAACCCTGTTTTACACAGTGCTTTACTATGAGTTAAAAAGCGAG

Function

GO:

id name namespace
GO:0004852 uroporphyrinogen-III synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251714.1 True 343 lncRNA 0.48 3 25744021 25750389

Neighbor

gene id symbol gene type direction distance location
LOC122351834 LOC107572957,LOC107663596,LOC107573769,LOC107728255,LOC107661170,LOC108265697 coding downstream 281172 25459895 ~ 25462849 (-)
gpbar1 LOC107656509,LOC107564146,LOC107688960,LOC107739693,LOC107596586 coding downstream 936240 24803623 ~ 24807781 (-)
zgc:92380 zgc:92380,LOC107656510,LOC107564128,LOC107688951,LOC107739632 coding downstream 946967 24789506 ~ 24797054 (-)
LOC122351587 NA coding downstream 957784 24784903 ~ 24786237 (-)
LOC122351585 LOC107656512,LOC107744835,LOC107596607,LOC107739743,LOC107688961,LOC107564147 coding downstream 971762 24768285 ~ 24772259 (-)
LOC122352035 rbms1,LOC107675130,LOC107730583,LOC107663836,LOC107722911 coding upstream 112364 25862753 ~ 25919696 (-)
gcgb gcgb,gcg,LOC107730589,LOC107677918,LOC107722905,LOC107674768,LOC105907977 coding upstream 314823 26065212 ~ 26067013 (-)
LOC122351282 fap,LOC107563829,LOC107722901,LOC107677917,LOC107561562 coding upstream 317849 26068238 ~ 26080787 (-)
ifih1 ifih1,LOC107722900,LOC107563828,LOC107730588,LOC107561563 coding upstream 331759 26082148 ~ 26104816 (-)
G73305 cdo1,LOC102791980 non-coding downstream 267083 25472266 ~ 25476938 (-)
G73302 NA non-coding downstream 354206 25351063 ~ 25389815 (-)
LOC122351187 NA non-coding downstream 649222 25092636 ~ 25094799 (-)
G73186 NA non-coding downstream 904060 24839606 ~ 24839961 (-)
LOC122351686 NA non-coding downstream 922959 24812316 ~ 24821062 (-)
G73350 NA non-coding upstream 83928 25834317 ~ 25846796 (-)
G73351 NA non-coding upstream 109939 25860328 ~ 25862412 (-)
G73308 NA non-coding upstream 195012 25945401 ~ 25965894 (-)
G73379 slc4a10,LOC107722898,LOC107674766,LOC107730592 non-coding upstream 293775 26044164 ~ 26045413 (-)
G73385 NA non-coding upstream 304478 26054867 ~ 26062832 (-)
G73300 LOC107577510,LOC107663597,LOC107729051,LOC107728259,LOC107661178 other downstream 285279 25456414 ~ 25458742 (-)
G73301 NA other downstream 394381 25348778 ~ 25349640 (-)
G73201 NA other downstream 713056 25027585 ~ 25030965 (-)
G72978 LOC107722896,LOC107674757,LOC107558607,LOC107677899,LOC107755197,LOC107600691 other downstream 1463313 24220522 ~ 24280708 (-)
grb14 grb14,LOC107722903,LOC107558602,LOC107677902 other downstream 1783696 23943985 ~ 23960325 (-)
G73347 NA other upstream 40128 25790517 ~ 25793056 (-)
LOC122351758 LOC107663860,LOC107722919,LOC107561565,LOC107585695,LOC107675138 other upstream 43694 25794083 ~ 25853303 (-)
LOC122351579 LOC107563831,LOC107730593,LOC107677922,LOC107674758,LOC107722906 other upstream 356268 26106657 ~ 26187631 (-)
fign fign,LOC107730568,LOC107722902,LOC107677893,LOC107674765,LOC107600675 other upstream 521987 26272376 ~ 26331126 (-)

Expression


Co-expression Network