LOC122351289


Basic Information

Item Value
gene id LOC122351289
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19674731 ~ 19681399 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251727.1
ATTAACGTTATGCGTAAGGACGTAACCGCGAAGTTTTCGCGTGTGCCCGCGGCGTGGACAAATTCgaagtttgttcatttttatcacaagaaaatgtttttttttcaacgcATTCAAGAAAGTTGTACATAAGAAGCAAACAAGTCTAACTGTCAAAGAGATTGTGAAGAATCCACGAGAACAAGAGCAGTTCCCACCTGGTTTCCATGGCATCTGTCCAACTCACAGCAGGAAAGGAAGCAGATCTCGGCAGTGCTGAGTTCGCCCTCTTCTGGACGGAATTACCACCACCCAGCAAATCACGAGATCATTTGGGATGCCAGCAGAATCAATATACagacaaaaatgtgattttttttaataacttctCACACACtctatattgtatttatataaaagttcTAATTTAAGCTAATTACTTTTATGTTTCATAAGCGTTAACATTTTTGTTCGTTTCTAGTTAAATGTGGCTAAGGTAACTTGAGATTCAATGAGTCACGTTaaatcactaaaaagaaccgtTCGTAAGAGTTATTCGTTGTCGAATCGAACTACATTGATCgcgatgaatgtttttgattcactaaaaacatTAGTGACAGCACTGTTAACTAAACGTGTAACGTCGTTGGGCGCTCCGACGCATgcaataaataagcattttacattttcgcTTCTGGTTTTTGAGAGGTGATTATTTACAaatgagtttttaaataaaaccatctaAATCATTTCTCAACAGCGTCATTCGCAAGGCAAAGCTCTGCGCAAAAGCGgatgttttttggggttttaagAAAAACGCATATTCGTTAACAGCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251727.1 True 826 lncRNA 0.38 4 19674731 19681399

Neighbor

gene id symbol gene type direction distance location
pofut2 LOC107741944,LOC107660604,LOC107714363,LOC107657505,LOC107565035 coding downstream 31798 19636451 ~ 19642933 (-)
abca12 LOC107657499,LOC107714367,LOC107602131,LOC107660608,LOC107741931,LOC107565025 coding downstream 39930 19569168 ~ 19634801 (-)
bard1 LOC107741928,LOC107660605,LOC107602130 coding downstream 105971 19546224 ~ 19568760 (-)
ikzf2 si:zfos-1425h8.1,LOC107741927,LOC107660609,LOC107662042,LOC107721023,LOC107556196,LOC107568511 coding downstream 389508 19259729 ~ 19285223 (-)
LOC122351886 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 coding downstream 425556 18980278 ~ 19249175 (-)
pms1 pms1,LOC107602147,LOC107728929,LOC107660601,LOC107714373,LOC107565013 coding upstream 3491 19684890 ~ 19708970 (-)
adat3 LOC107728938,LOC107714375,LOC107681677,LOC107565014,LOC107660599,LOC107602133 coding upstream 32086 19713485 ~ 19716443 (-)
asnsd1 asnsd1,LOC107728934,LOC107660596,LOC107714374 coding upstream 52501 19733900 ~ 19736121 (-)
LOC122352057 NA coding upstream 54634 19736033 ~ 19737211 (-)
wdr75 wdr75,LOC107660592,LOC107714378,LOC107728907,LOC107657531,LOC107602136,LOC107565028 coding upstream 69143 19750542 ~ 19766793 (-)
G71667 cunh2orf88,LOC107728910,LOC107657540,LOC107714370,LOC798500,LOC103027948 non-coding downstream 3567 19667000 ~ 19671164 (-)
G71587 NA non-coding downstream 130884 19458787 ~ 19543847 (-)
LOC122351304 NA non-coding downstream 149141 19519740 ~ 19525590 (-)
LOC122351387 NA non-coding downstream 166646 19496912 ~ 19508085 (-)
LOC122351235 NA non-coding downstream 215631 19443445 ~ 19459100 (-)
G71645 NA non-coding upstream 27985 19709384 ~ 19712184 (-)
G71692 NA non-coding upstream 109848 19791247 ~ 19791560 (-)
G71727 NA non-coding upstream 205776 19887175 ~ 19941547 (-)
G71732 NA non-coding upstream 234800 19916199 ~ 19922691 (-)
G71912 LOC107602164,LOC107660650,LOC107728931 non-coding upstream 481724 20163123 ~ 20630423 (-)
LOC122352185 NA other downstream 1104849 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 1308464 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 2153171 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 2419240 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 2785184 16886753 ~ 16889547 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 38543 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 114853 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 152521 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 200151 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 807765 20489164 ~ 20503890 (-)

Expression


Co-expression Network