LOC122351301


Basic Information

Item Value
gene id LOC122351301
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6117851 ~ 6142682 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251731.1
ACTTAGTTTCTAGTCGGGCTTACCTTGGCTGTACTCTCGTCTATGCTCAAAGAAACTGCGAGAAGAAAAACGGTGACACATGGAAGCCGCATCTTCGCGCCTATGAATAATGTCCAAAAGGACACGCTGCTGACGGATTCTTCTCCGTTTCAAGCGATTCTTGCCTCTCTTCTTTCCGAGCTTGAACTATACGTTTGTCTGCATCTTTGCTCTAAACGATATGTGGCCGTTGTTGAAAGTAATGTCTTGTAGAAGAGCCCACCACACCCCCTGTCAGGACCACGACCACCCATCAATACGCACCAACGCAACCCTGTTTAGAACAACTATCACTCGCGTTTCAACATTGTTAGAGGTTAGTTTAAGTCTTGGAGATCGGTAATTCTCTTTAAACAGCTTTGGCGAGGTGGATTTTAGGCGAGAAAACCAACTTTCCCTAAACGCGAGCGCATCGGGATTGAGCGCGTGAGACCGGAGCGTGCGAGATCCGAGATCATAAATCTGTAAGATCATTGAGTATGCAGTAACAGGATACTGGAATTGGGCAGAAGGAGAGATTTCATCTGTTTTCTGGCTCGCATGGAGGGTGAGAACCATCTACAGCACTGGAACACATTAAGGTGTTTTCTGTTGTGCTTTGCCGTCCTTATCCTTACGACAGAGGTCAACGcagGAGTGAAGAAGAGCGGTGGACCATGTGGCGGGAGAGACTGCAGCGGAGGGTGTCAGTGCTTTCCTGAAAAGGGTGCGAGGGTAA

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251731.1 True 757 lncRNA 0.48 4 6117851 6142682

Neighbor

gene id symbol gene type direction distance location
LOC122351467 abi2,LOC107738105,LOC107752895 coding downstream 19047 6088469 ~ 6098804 (-)
LOC122351466 LOC107670336,LOC107720941 coding downstream 30832 6069745 ~ 6087019 (-)
LOC122351270 LOC107730457,LOC107549918,LOC107670341,LOC107752618 coding downstream 138973 5975136 ~ 5978878 (-)
LOC122351906 LOC107670338,LOC107721263 coding downstream 218208 5888893 ~ 5899643 (-)
LOC122351923 LOC107549895,LOC107549742,LOC107689504,LOC107752607,LOC107720938 coding downstream 241460 5875474 ~ 5876391 (-)
myo16 myo16,LOC107716764,LOC107688718 coding upstream 176408 6319090 ~ 6477546 (-)
tnfsf13b tnfsf13b,LOC107702981,LOC107688720,LOC107721586 coding upstream 344556 6487238 ~ 6492356 (-)
abhd13 abhd13,LOC107570096,LOC107702974,LOC107688719,LOC107551070 coding upstream 349927 6492609 ~ 6498204 (-)
LOC122352171 fam155a,LOC107716804,LOC107721616,LOC107570097,LOC107702989,LOC107688721,LOC101886421,LOC107735187 coding upstream 358727 6501409 ~ 6599198 (-)
LOC122351204 LOC107716777,LOC107688771,LOC100331465,LOC107602892,LOC107702999 coding upstream 543536 6686218 ~ 6708208 (-)
G68120 dip2a non-coding downstream 70255 6045115 ~ 6047596 (-)
G68082 NA non-coding downstream 311524 5805940 ~ 5806327 (-)
G68055 NA non-coding downstream 382068 5735337 ~ 5735783 (-)
G68053 NA non-coding downstream 382679 5734924 ~ 5735172 (-)
G68048 NA non-coding downstream 402214 5715341 ~ 5715637 (-)
G68189 NA non-coding upstream 98640 6241322 ~ 6241602 (-)
G68265 NA non-coding upstream 537413 6680095 ~ 6683011 (-)
G68266 NA non-coding upstream 555004 6697686 ~ 6697893 (-)
G68270 LOC107716762,LOC107688772,LOC107602882,LOC107721583 non-coding upstream 573314 6715996 ~ 6718143 (-)
LOC122351577 NA non-coding upstream 632392 6775074 ~ 6776974 (-)
LOC122351979 NA other downstream 17939 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 73926 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 186715 5912855 ~ 5931136 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 717971 5396865 ~ 5399880 (-)
LOC122351925 NA other downstream 748262 5349955 ~ 5369589 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other upstream 104218 6246900 ~ 6261069 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other upstream 928303 7070985 ~ 7153954 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 1871767 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 1933786 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 3765506 9908188 ~ 9910178 (-)

Expression


Co-expression Network