LOC122351351


Basic Information

Item Value
gene id LOC122351351
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 3586803 ~ 3592240 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251740.1
tttcaggatattcaagaacatttaaatataaaccttGATAAACATGTTCAGTGTCACAAAGTATTAATTTCACTTGTTGTGTAAGCATacataaaagcagaaatgtggtCCTGAAGCACAGAACGCGTGAAAAATAGCACGGGTGCATGGTATGGCTCAAAATCATTTAGATATCAATCCTAATGTTGTATCCTAACAAACTATACATCATGTATAaatctcatttcatttttttaattgttcatgACTGGTTTCGTGGTCACAAATACCATGGCAtcagaacgatagatagaaaCATCAGTTAATAATGACTTCCATTATGTTTTTCCTAGTGAAGTCCGTTCAGGTGTAATGACAGACGGACTACGGGTGAAAACTTCACCTCCAGGAGCCCCGCTCGCGTCTTTTGACCTACCAGGAAAAGTGTCTAGGCTTCTCAGAAGTGTGCTGATAGCTGCGGACTCTTCGAGCAGATGTCAAAACACCCGGCCCGTGCCTCAGATATCTGCGTGGTAACAACGTTTGTGACGTCAGTCCCTGCGTTCTGTCATTTCCACAGCAGAACCCAGTCATTTCAAGCACAGCTGCAATGGACTCGCTTCACGAATGCTCTACGTGTTACGTTTGTTTCCTTCAGGCGCTGTTTTTCGTGTAGTATTTAAGGGGAGGGAGTTGTTCGCTAATCGTGTTGTTTCATACAGAAGTTGTGCGATGATCAGACTCATCACACGCTCATGCCTGGAGGACTGTGACCTCTGCGTGAACATCGTCCTCTATTTAAAGCTACTACAATAAATAGGAGTGTGCGAATAAACTCGTACACAAACGGACGTGTGCAAGCGTGTTTGTTCCCTTTGTTTGGCAGTATTTGATGAGGTGAGTCTGACTCACATGTGCCTGTGCTAACAAGCTTCCTGATGCTGCTGATACTGGACAGAGGGATGGAAAGAGGAAGCGGCTCATTAGAACATGGGATCGGAGGCAGTAGAACGTTTCTGATTACGCTTTCAGACACTTAAAATGTTCGGCTTATTAGAAAAATGTGCCTGTGGGGACAGTTCTTCTAGCACTACGAAATGTCAGTTCATATCCGACGGCGTTTTATGTTGATTTTGAATGCATGCTTCAGTTCGGAAATTAAAGTTCTGCTGATTGATTGGTTTATAATggattgatttaaaaaagaatatcCATACATCCAGCAATTAGCACTTTTGGTTTATTGTAAGAAAACACTGAAGTTGTTTTGAAGCTGAAGCTGCGACTTTAAATGCTTACGGTCGTTGAACAGCATTTGTCAtctttttatatcaaaatgcttgctacAAATTCAAGAACACAGAAGATCAAACCTGAtcggattttttttaatgacggACAAATGTTTCAGAGGCAGTGTATAAAAGTGATTGACTCAACATGAGCTTTTAACGCATGAAAAGTTTGGACAAAAATGAAGTATGCAGTCAAAGGAGTCTTCCTTTGTTCATTACGGTGTGGACTATAGTATCTTTATAGCTATCTTCCTTGGCGTGCGCAGGCCCGTGTTCAGTGAAAAGTCTCAAAAGTGAGAATGCTAAAACTTTAATTGATAGTAGTTTTTTCGATTCTGCTTTTTCCCCTCACGCAAACGATTATATATAACATGAGTTAAAATTAGGCACTACTTTTATGTTTCCAAGTTCAGTGTGAACTTTTGTTGTATGGAGAAGAGCAGCTAAGATTCGTGCAGCGGCCccagtgaataaatgatgacagaactttggCAGGTTTGGGACGAGCGCATATTTCACAGTCCGTCAGCTGTTATCTCATTTTCCATTACCGGACAATGAGGGATTCTTGGGTCATGTGAGGGGTTTTCCACAAGAAAGTATGGGAGGCCAGGTGTCTGGGCATAGAGGAGATGTGTCAGCTAGGACTATATCTGTCGTGGCTATTGGGTCAGGATTACAacagtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacaggggGCTGTTTTAGGATCTTGGGAGACCCATGAACGACCACAGGTGCTCCTCAGGTGGGCTTTAACACAAGGCTGTCGTTACTACCCAATTACTCCATCAGAAACTGCCAGCACTAGACTGCCGTTAGCACTTGATGTTCTCAAAATAGCCTTTTTGTACTCCAATTGGTCAATATAGCACAGTTTTCTAATTTCATTCAAACTAATAAGTGCTGAGTTTGTGGAAGTATGCGTGGTTTGAGCTGCGTCCTCCAGTGCTTCTCTGAACCAAATCCGTGCAGGAATGCAGTTCCCCTCGGTCTGAAGATTGAATCTGTCCTGTTCGTCCTCATGGGGGTGTCAAAGAGGAGAATATGAATATTCGAGGCCTCATCCGTCAAGACCAACAAGGTGCCAAGGGTTCAGTGTGAGGCTATGGGGCATGATGGATAAGACTGGACACCGGATCGTCCTCTCTTTTGTTTCTGCTGGAGAGGGGAAGCAGATTCCAGCCCTGCAATTCACCCTCAACTGCTGCTTTCCTCTGCCAAATCACTGCAGCTTCCACAAGCGCTGGTGTCACATGGGATGCAAACACGTCCAGATGTCTTGGACTGAGTCTAACTTGGTTTATAAATCACAGCAACATTCAGTCAGACttgtgtttctcagtttgttctgtcactgcagtttacaaaaaatgtaaataatgtcattatttactttatatactttatataatttctaattTGTGCCAGTGGTTAGAAGGTCATCAAGTTTGGAcggacacgagggtgagtaaaagagTGACCTGTCCGTTTAACgttgctgtgtgtttgtctttatctcatatttttacatgattCCTGCTCTTCTCATCATTCTTGTGGTCTTTCGTCACTGGATTATGGGTGTGACGCTGAGTCGTACTCTACAGCATGATTAGTTTAGCAGGATGTTcagttcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccagctgGCCCATGCTGACCCACACCTCTCATTTTCCCAGCACTGAGTCCAGGCTCCGTCCACAGCTGCATACTGGCCTCTCGCTGCTGCCCGATGCAAACCAACGGTCACTTAGCATTTCATCACTTGATTCGCTCCGTAGAAAAACCCTGGGAGACCCGACGATAAACTACAGAACACATTCTGTGTGGATCCTCTAAAGTCAGTTGCAAAAGAACCTTTTCACCATAGAAGATACTGTCTCGATGGCATTTTTCGCCGTATTGACGTCTACAAATGAAAGTTAAAGTTCCCACAGTCACCGCCACCATTTTCCCCTAAATTTTTTTTGATTGCCTTTCTCCCAGGAGacagtaaattatgcattacGCCAGATCGTTCCATAACGAGTCATATTTTAACAAGACACTGATGTATAGAGCCTGTGTTTCTGACAGTATCTCTGCTGCTATTACTCAGGACACACCCCCCCTCTGCTCATGTGCATTCCTGCAGGAGATCGCTGACATCACTGACCCGCTTCGGAGTCGTGACCTTTAACCTCGAAGGACAAGTGGACTAAAATCGACCgagcttttttcattttttcctacACTGGGTGTATCATACCAGTACTCGCTTGAACTGTGAGAAAAGCATGCTCATACTGCGCACGCAAATAATTCCCAGTACGCCCCATTGTAAACCGAGAGCAAATGTTTCAGAAATCTAAAGAAGGCGCGCAGCTCTGAATGAAGTTCTTTGATACAGCGTGCGTGTAAAGTGGCCGGGTGTGTAACGAGACTCATTAGTGTGTAATGATGCAGAACCTGAAGTCTGGAACGTTTCAGTTCTCTTTCTGTGAATTTACACAATGATGCTTTACGATGCcagaatttgatttattttcattagttgCCTATTATGGACGTTGTAGACAAAGGACAGTTGAACAGGTATATCCCTCAACCTCAATTTCATTCAATCGCATGaaattgctatttttcattTGGATGAACGATTAATATGATGTGTGCATTAGGAAAACAGGCTAAGTCAGGTTTTAGTTTCATGttgatttgaaatagaatttttgGTTAAATTATGATCAGTTCTAACTGCTTAAGTATAAAAGAAGTGCGGAAATATGCCTATGTGCGTTTCTTGAAACACAAAGCTGGTGCTGCCGTGCCCCGTTCATTGACCAGAGAGTAAATACGACACAAGCAGTGCCTTATTTATTGAAGTAACATGCACTATCAAGTCTGCATGTCCTGTCCTGAGTAACTTTAGTATTAGGAAACACTGTGCCCACGTTTATCCCTGGACTCCGTTCTGCATGCCTGCAGGTCATGTTGCGCAGATCACAGCATCATGTGATCGCCAGAGACATTTTTACATCTTTTGAAACGGTTACTGCGGCTCCAATGCTGAAAGTTACTCCGCTGGATGTGGCGGTTAATATATAAAGAGAAGATCATGGAGACAGCAAGCCGTAATGTTGACtttgatatttgttttattcgagaatataaaatctttgaaatctTGCATAGCGTTTATTTCCTCATAGCATAGTCTTTTTAGCCTATAGGCATCATTCCTGGATCGGCGGACTGTTCTTTTAGGTTTAGTTCTTTTATTAGTAATCTTCCGCCTGCCGGTTTATATGCGGAGTCATTTGTGCGGTGGAAAACATCGCGCACGACTCATAAATCTGGGCAAGTCAGAACAGGGCAAGTGGCGTATCTGGAGAAGTGGCGGAGGTGAAGCCAGAGGAAAGACTGAGCATCTGTCTCTTTTGTTTGAGGAGAACCAGCTCTGCACATGGCCGTTACTCACTGCGTCGAGGTGGGCGGTAATAAGACAAGGTCAGCGCACGCCCCGTCCCTGCAGGCGTGCAGATGCTGAGGCCCTCAGGTGTCCTGACACAGGCGTGGGCTGAAAGCAGACCTTTTAACGCTGCTATCAAA
>XR_006251741.1
tttcaggatattcaagaacatttaaatataaaccttGATAAACATGTTCAGTGTCACAAAGTATTAATTTCACTTGTTGTGTAAGCATacataaaagcagaaatgtggtCCTGAAGCACAGAACGCGTGAAAAATAGCACGGGTGCATGGTATGGCTCAAAATCATTTAGATATCAATCCTAATGTTGTATCCTAACAAACTATACATCATGTATAaatctcatttcatttttttaattgttcatgACTGGTTTCGTGGTCACAAATACCATGGCAtcagaacgatagatagaaaCATCAGTTAATAATGACTTCCATTATGTTTTTCCTAGTGAAGTCCGTTCAGGTGTAATGACAGACGGACTACGGGTGAAAACTTCACCTCCAGGAGCCCCGCTCGCGTCTTTTGACCTACCAGGAAAAGTGTCTAGGCTTCTCAGAAGTGTGCTGATAGCTGCGGGTAAAGGTTTATTTCCTCTGCGATGTGTAGCTATTCAGGCAGCGGTTTTGTTCAGGCAATAATCTCTTTCATGTTCCTCAGACTCTTCGAGCAGATGTCAAAACACCCGGCCCGTGCCTCAGATATCTGCGTGGTAACAACGTTTGTGACGTCAGTCCCTGCGTTCTGTCATTTCCACAGCAGAACCCAGTCATTTCAAGCACAGCTGCAATGGACTCGCTTCACGAATGCTCTACGTGTTACGTTTGTTTCCTTCAGGCGCTGTTTTTCGTGTAGTATTTAAGGGGAGGGAGTTGTTCGCTAATCGTGTTGTTTCATACAGAAGTTGTGCGATGATCAGACTCATCACACGCTCATGCCTGGAGGACTGTGACCTCTGCGTGAACATCGTCCTCTATTTAAAGCTACTACAATAAATAGGAGTGTGCGAATAAACTCGTACACAAACGGACGTGTGCAAGCGTGTTTGTTCCCTTTGTTTGGCAGTATTTGATGAGGTGAGTCTGACTCACATGTGCCTGTGCTAACAAGCTTCCTGATGCTGCTGATACTGGACAGAGGGATGGAAAGAGGAAGCGGCTCATTAGAACATGGGATCGGAGGCAGTAGAACGTTTCTGATTACGCTTTCAGACACTTAAAATGTTCGGCTTATTAGAAAAATGTGCCTGTGGGGACAGTTCTTCTAGCACTACGAAATGTCAGTTCATATCCGACGGCGTTTTATGTTGATTTTGAATGCATGCTTCAGTTCGGAAATTAAAGTTCTGCTGATTGATTGGTTTATAATggattgatttaaaaaagaatatcCATACATCCAGCAATTAGCACTTTTGGTTTATTGTAAGAAAACACTGAAGTTGTTTTGAAGCTGAAGCTGCGACTTTAAATGCTTACGGTCGTTGAACAGCATTTGTCAtctttttatatcaaaatgcttgctacAAATTCAAGAACACAGAAGATCAAACCTGAtcggattttttttaatgacggACAAATGTTTCAGAGGCAGTGTATAAAAGTGATTGACTCAACATGAGCTTTTAACGCATGAAAAGTTTGGACAAAAATGAAGTATGCAGTCAAAGGAGTCTTCCTTTGTTCATTACGGTGTGGACTATAGTATCTTTATAGCTATCTTCCTTGGCGTGCGCAGGCCCGTGTTCAGTGAAAAGTCTCAAAAGTGAGAATGCTAAAACTTTAATTGATAGTAGTTTTTTCGATTCTGCTTTTTCCCCTCACGCAAACGATTATATATAACATGAGTTAAAATTAGGCACTACTTTTATGTTTCCAAGTTCAGTGTGAACTTTTGTTGTATGGAGAAGAGCAGCTAAGATTCGTGCAGCGGCCccagtgaataaatgatgacagaactttggCAGGTTTGGGACGAGCGCATATTTCACAGTCCGTCAGCTGTTATCTCATTTTCCATTACCGGACAATGAGGGATTCTTGGGTCATGTGAGGGGTTTTCCACAAGAAAGTATGGGAGGCCAGGTGTCTGGGCATAGAGGAGATGTGTCAGCTAGGACTATATCTGTCGTGGCTATTGGGTCAGGATTACAacagtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacaggggGCTGTTTTAGGATCTTGGGAGACCCATGAACGACCACAGGTGCTCCTCAGGTGGGCTTTAACACAAGGCTGTCGTTACTACCCAATTACTCCATCAGAAACTGCCAGCACTAGACTGCCGTTAGCACTTGATGTTCTCAAAATAGCCTTTTTGTACTCCAATTGGTCAATATAGCACAGTTTTCTAATTTCATTCAAACTAATAAGTGCTGAGTTTGTGGAAGTATGCGTGGTTTGAGCTGCGTCCTCCAGTGCTTCTCTGAACCAAATCCGTGCAGGAATGCAGTTCCCCTCGGTCTGAAGATTGAATCTGTCCTGTTCGTCCTCATGGGGGTGTCAAAGAGGAGAATATGAATATTCGAGGCCTCATCCGTCAAGACCAACAAGGTGCCAAGGGTTCAGTGTGAGGCTATGGGGCATGATGGATAAGACTGGACACCGGATCGTCCTCTCTTTTGTTTCTGCTGGAGAGGGGAAGCAGATTCCAGCCCTGCAATTCACCCTCAACTGCTGCTTTCCTCTGCCAAATCACTGCAGCTTCCACAAGCGCTGGTGTCACATGGGATGCAAACACGTCCAGATGTCTTGGACTGAGTCTAACTTGGTTTATAAATCACAGCAACATTCAGTCAGACttgtgtttctcagtttgttctgtcactgcagtttacaaaaaatgtaaataatgtcattatttactttatatactttatataatttctaattTGTGCCAGTGGTTAGAAGGTCATCAAGTTTGGAcggacacgaggCACTGAGTCCAGGCTCCGTCCACAGCTGCATACTGGCCTCTCGCTGCTGCCCGATGCAAACCAACGGTCACTTAGCATTTCATCACTTGATTCGCTCCGTAGAAAAACCCTGGGAGACCCGACGATAAACTACAGAACACATTCTGTGTGGATCCTCTAAAGTCAGTTGCAAAAGAACCTTTTCACCATAGAAGATACTGTCTCGATGGCATTTTTCGCCGTATTGACGTCTACAAATGAAAGTTAAAGTTCCCACAGTCACCGCCACCATTTTCCCCTAAATTTTTTTTGATTGCCTTTCTCCCAGGAGacagtaaattatgcattacGCCAGATCGTTCCATAACGAGTCATATTTTAACAAGACACTGATGTATAGAGCCTGTGTTTCTGACAGTATCTCTGCTGCTATTACTCAGGACACACCCCCCCTCTGCTCATGTGCATTCCTGCAGGAGATCGCTGACATCACTGACCCGCTTCGGAGTCGTGACCTTTAACCTCGAAGGACAAGTGGACTAAAATCGACCgagcttttttcattttttcctacACTGGGTGTATCATACCAGTACTCGCTTGAACTGTGAGAAAAGCATGCTCATACTGCGCACGCAAATAATTCCCAGTACGCCCCATTGTAAACCGAGAGCAAATGTTTCAGAAATCTAAAGAAGGCGCGCAGCTCTGAATGAAGTTCTTTGATACAGCGTGCGTGTAAAGTGGCCGGGTGTGTAACGAGACTCATTAGTGTGTAATGATGCAGAACCTGAAGTCTGGAACGTTTCAGTTCTCTTTCTGTGAATTTACACAATGATGCTTTACGATGCcagaatttgatttattttcattagttgCCTATTATGGACGTTGTAGACAAAGGACAGTTGAACAGGTATATCCCTCAACCTCAATTTCATTCAATCGCATGaaattgctatttttcattTGGATGAACGATTAATATGATGTGTGCATTAGGAAAACAGGCTAAGTCAGGTTTTAGTTTCATGttgatttgaaatagaatttttgGTTAAATTATGATCAGTTCTAACTGCTTAAGTATAAAAGAAGTGCGGAAATATGCCTATGTGCGTTTCTTGAAACACAAAGCTGGTGCTGCCGTGCCCCGTTCATTGACCAGAGAGTAAATACGACACAAGCAGTGCCTTATTTATTGAAGTAACATGCACTATCAAGTCTGCATGTCCTGTCCTGAGTAACTTTAGTATTAGGAAACACTGTGCCCACGTTTATCCCTGGACTCCGTTCTGCATGCCTGCAGGTCATGTTGCGCAGATCACAGCATCATGTGATCGCCAGAGACATTTTTACATCTTTTGAAACGGTTACTGCGGCTCCAATGCTGAAAGTTACTCCGCTGGATGTGGCGGTTAATATATAAAGAGAAGATCATGGAGACAGCAAGCCGTAATGTTGACtttgatatttgttttattcgagaatataaaatctttgaaatctTGCATAGCGTTTATTTCCTCATAGCATAGTCTTTTTAGCCTATAGGCATCATTCCTGGATCGGCGGACTGTTCTTTTAGGTTTAGTTCTTTTATTAGTAATCTTCCGCCTGCCGGTTTATATGCGGAGTCATTTGTGCGGTGGAAAACATCGCGCACGACTCATAAATCTGGGCAAGTCAGAACAGGGCAAGTGGCGTATCTGGAGAAGTGGCGGAGGTGAAGCCAGAGGAAAGACTGAGCATCTGTCTCTTTTGTTTGAGGAGAACCAGCTCTGCACATGGCCGTTACTCACTGCGTCGAGGTGGGCGGTAATAAGACAAGGTCAGCGCACGCCCCGTCCCTGCAGGCGTGCAGATGCTGAGGCCCTCAGGTGTCCTGACACAGGCGTGGGCTGAAAGCAGACCTTTTAACGCTGCTATCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251740.1 True 4938 lncRNA 0.43 3 3586803 3592240
XR_006251741.1 False 4767 lncRNA 0.43 3 3586803 3592240

Neighbor

gene id symbol gene type direction distance location
vwa8 vwa8 coding upstream 2112 3507925 ~ 3584691 (+)
epsti1 epsti1,LOC107549908 coding upstream 202626 3363734 ~ 3384177 (+)
enox1 enox1,LOC107661308,LOC107713727,LOC107561323,LOC107688647 coding upstream 448858 3054362 ~ 3137945 (+)
tsc22d1 tsc22d1,LOC107551985,LOC107748883,LOC107713726,LOC107576221,LOC107561310,LOC107688650 coding upstream 570294 2978307 ~ 3016509 (+)
kctd4 kctd4,LOC107748885,LOC107688678,LOC107713709,LOC107580010 coding upstream 618838 2966046 ~ 2967965 (+)
mycbp2 mycbp2,LOC107549765,LOC107664005 coding downstream 78322 3670562 ~ 3742739 (+)
fbxl3a fbxl3,fbxl3a,LOC107549764,LOC107664003,LOC107670904 coding downstream 151766 3744006 ~ 3752623 (+)
rsph1 rsph1,LOC107749034,LOC107728239,LOC107670901,LOC107663994 coding downstream 162576 3754816 ~ 3759215 (+)
stx19 stx19,LOC107664001,LOC107749033,LOC107728237 coding downstream 168593 3760833 ~ 3767537 (+)
LOC122351330 LOC107571834,LOC107657380,LOC107716910 coding downstream 314501 3906741 ~ 3910820 (+)
G67396 NA non-coding upstream 145059 3437097 ~ 3441744 (+)
G67389 NA non-coding upstream 162382 3419087 ~ 3424421 (+)
G67348 NA non-coding upstream 199611 3386972 ~ 3387192 (+)
G67347 NA non-coding upstream 200853 3385630 ~ 3385950 (+)
G67296 NA non-coding upstream 533581 3052494 ~ 3053222 (+)
G67418 NA non-coding downstream 9078 3601318 ~ 3638082 (+)
LOC122351601 LOC107749038,LOC107663997 non-coding downstream 14330 3606570 ~ 3619306 (+)
LOC122351161 NA non-coding downstream 50721 3642961 ~ 3646614 (+)
G67448 NA non-coding downstream 236583 3828823 ~ 3829772 (+)
G67562 LOC107588232,LOC107742953,LOC107671312,LOC107657349 non-coding downstream 354294 3946534 ~ 4031820 (+)
LOC122351398 dnajc15,LOC107549910 other upstream 306751 3262607 ~ 3280052 (+)
LOC122351419 polr2e,polr2eb,LOC107592678,LOC107669821,LOC107599482 other upstream 390185 3194773 ~ 3196618 (+)
bpifcl bpi other upstream 1850483 1713812 ~ 1736320 (+)
G66795 NA other upstream 2451814 1127526 ~ 1134989 (+)
LOC122351650 si:ch1073-55a19.2,LOC107670647,LOC107709149,LOC107686982,LOC107559216,LOC108440489,LOC107686979,LOC107709150 other upstream 2687424 858680 ~ 899379 (+)
LOC122352174 rbm45,LOC107716918,LOC107752596 other downstream 321398 3913638 ~ 3922878 (+)
G67566 LOC107742952,LOC107718452,LOC107671286,LOC107715667 other downstream 355796 3948036 ~ 3983582 (+)
cdca7a LOC107718452,LOC107671286,LOC107588247,LOC107742973,LOC107657370,LOC107600694 other downstream 389106 3981346 ~ 3985962 (+)
scrn3 scrn3,LOC107739455,LOC107671317,LOC107588231,LOC107657366,LOC107600698 other downstream 528287 4120527 ~ 4127013 (+)
G67630 NA other downstream 548814 4141054 ~ 4222171 (+)

Expression


Co-expression Network