LOC122351403


Basic Information

Item Value
gene id LOC122351403
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 8600724 ~ 8614984 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251751.1
GCCGTTTCAACGCTATGCGGAAGACTTCAAAACACGAACAGCAGACAGaccACCTCATTACAACTGTGCAGATCCCCCAAGTTGAACGGCATCTGTGCACGAGGGAGAACAGACGTCAAAAGCATTGATATGCAGCTCTTGACAGGGTCAGgCTTTCTGATTTTAGTGACCTGGTTGGGAACATTTTGCTTAGATCCTAATGATGGAGGCGGTGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251751.1 True 218 lncRNA 0.49 3 8600724 8614984

Neighbor

gene id symbol gene type direction distance location
nup35 nup35,LOC107663916,LOC107749876,LOC107668364,LOC107752922 coding upstream 30727 8566454 ~ 8569997 (+)
zgc:162707 zgc:162707,cunh3orf70,LOC107749877,LOC107596553,LOC107592986 coding upstream 71853 8520934 ~ 8528871 (+)
ehhadh ehhadh,LOC107596516 coding upstream 81378 8510712 ~ 8519346 (+)
tra2b LOC107668395,LOC107677789,LOC107592988,LOC107749892 coding upstream 141399 8453604 ~ 8459325 (+)
tspearb tspearb,LOC107749903,LOC107677782,LOC107752923,LOC107593006,LOC107668351 coding upstream 148051 8442360 ~ 8452673 (+)
znf804a znf804a,LOC107562107,LOC107749875,LOC107752876,LOC107672201,LOC107663892,LOC107560471 coding downstream 36183 8651167 ~ 8702295 (+)
zc3h15 zc3h15,LOC107562108,LOC107663835,LOC107749874,LOC107752875,LOC107672221 coding downstream 178333 8793317 ~ 8797935 (+)
itgav itgav,LOC107663834,LOC107672211,LOC107752904 coding downstream 186313 8801297 ~ 8824391 (+)
umps umps coding downstream 212706 8827690 ~ 8831902 (+)
chpfa chpfa,LOC107749870,LOC107663851,LOC107571864,LOC107672254,LOC107743933 coding downstream 351877 8966861 ~ 8976999 (+)
G68678 NA non-coding upstream 377907 8222587 ~ 8222817 (+)
G68668 NA non-coding upstream 394761 8203853 ~ 8205963 (+)
G68446 NA non-coding upstream 746446 7853481 ~ 7854278 (+)
G68435 NA non-coding upstream 1264365 7335491 ~ 7336359 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding upstream 1299229 7280767 ~ 7301495 (+)
G68808 NA non-coding downstream 211228 8826212 ~ 8827046 (+)
LOC122352063 NA non-coding downstream 244489 8859473 ~ 8860379 (+)
G68879 asic4a,asic4,LOC107672268,LOC107663852,LOC107560474,LOC107749871,LOC107571863 non-coding downstream 432476 9047460 ~ 9078537 (+)
G68880 NA non-coding downstream 448136 9063120 ~ 9064676 (+)
G68895 NA non-coding downstream 561340 9176324 ~ 9178926 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other upstream 94581 8460744 ~ 8506143 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other upstream 167241 8431111 ~ 8433483 (+)
si:ch211-167j6.3 NA other upstream 257973 8341295 ~ 8342751 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 2627601 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 2714971 5883927 ~ 5885753 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 248403 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 252113 8867097 ~ 8871633 (+)
si:ch1073-416j23.1 si:ch1073-416j23.1,LOC107749868,LOC107663920,LOC107556448 other downstream 527608 9142592 ~ 9150093 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other downstream 541061 9156045 ~ 9160821 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other downstream 828141 9443125 ~ 9566997 (+)

Expression


Co-expression Network