LOC122352120


Basic Information

Item Value
gene id LOC122352120
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14173817 ~ 14189001 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251857.1
TCTAGAGAGCAGCTGATTACTTGGTAAATCAGCGTCTTTTCAGTGGCGTCTACTGCAGGatggatattaaaatatgtaatacgTTTTGGTTTGACAACAGCGTTAATATGTGAACTATCACAATTAAATGTGATGTAACAACATTACATCCCGAGATCATTCACAAATGTGACAAAAGAGAAGAAACGCCTTCCGGGAGAAGTTCATCAGGCCGAGaaatgcaTGATATTGTGCAAGGGGTAGACACATCAACTATCagtggagggtcagaaagctctgaGATTATATAGGACTTCTTTTGTGTGCTGAAGATAAACACAAGACTTgcaatgacatgaagGGATCATACGGCAAGATCTGATACAGTCGCTCATGCCAAACATAGACATGTAATCAGCATAGTCTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251857.1 True 409 lncRNA 0.41 3 14173817 14189001

Neighbor

gene id symbol gene type direction distance location
LOC122352116 LOC107568713,LOC107555340,LOC107555339,LOC107555341,LOC107664838,LOC107705172 coding downstream 1299 14171789 ~ 14172518 (-)
crygs4 crygs4,LOC107723662,LOC107555042,LOC107669732,LOC107658282,LOC107705158 coding downstream 76203 14096875 ~ 14097614 (-)
crygs3 crygs3,LOC107555333,LOC107658281,LOC107705159,LOC107723661,LOC107686303 coding downstream 79925 14092927 ~ 14093892 (-)
LOC122351370 LOC107723674,LOC107672245,LOC107555347,LOC567728,LOC107555039,LOC107658284,LOC107729411 coding downstream 87046 13985015 ~ 14086771 (-)
etv5a etv5,etv5a,LOC107723673,LOC107729410,LOC107658285,LOC107673585 coding downstream 188655 13974047 ~ 13985162 (-)
LOC122351874 crygm1,zgc:153846,LOC107568769,LOC107668858,LOC107724461,LOC107705171 coding upstream 603 14189604 ~ 14190624 (-)
crygm1 crygm1,zgc:153846,LOC107568769,LOC107668858,LOC107724461,LOC107705171 coding upstream 5682 14194683 ~ 14195492 (-)
LOC122351901 si:dkey-57a22.15,LOC107668860,LOC107597434,LOC107724448,LOC107658273,LOC107568805,LOC107705156 coding upstream 7703 14196704 ~ 14197466 (-)
crygm6 crygm6,LOC107724479,LOC107568790,LOC107668857,LOC107658269,LOC107705155 coding upstream 10225 14199226 ~ 14200065 (-)
si:dkey-57a22.14 LOC107724481,LOC107668873,LOC107597431,LOC107658270,LOC107705154,LOC107568754 coding upstream 11867 14200868 ~ 14201664 (-)
G70309 NA non-coding downstream 248981 13924616 ~ 13924836 (-)
G70308 NA non-coding downstream 249713 13923749 ~ 13924104 (-)
G70306 NA non-coding downstream 295405 13878124 ~ 13878412 (-)
G70305 LOC107725229,LOC107658288 non-coding downstream 297351 13873518 ~ 13876466 (-)
G70303 NA non-coding downstream 300806 13872706 ~ 13873011 (-)
G70332 LOC107724468 non-coding upstream 55286 14244287 ~ 14247328 (-)
G70382 NA non-coding upstream 288331 14477332 ~ 14562992 (-)
G70393 NA non-coding upstream 400857 14589858 ~ 14590275 (-)
G70396 NA non-coding upstream 405262 14594263 ~ 14595342 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding upstream 727799 14916800 ~ 14918840 (-)
G70294 NA other downstream 233949 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 260874 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 360490 13807822 ~ 13813327 (-)
tmem163a tmem163a,LOC107658221,LOC107725256,LOC107684456,LOC107555363,LOC106586306,LOC106582396 other downstream 500010 13642303 ~ 13673807 (-)
gypc gypc,LOC107723681,LOC107725252,LOC107555063,LOC107567781,LOC107684853,LOC107695565 other downstream 678150 13473135 ~ 13495667 (-)
G70317 NA other upstream 7478 14196479 ~ 14253776 (-)
LOC122351495 NA other upstream 170645 14359646 ~ 14372674 (-)
G70549 NA other upstream 1114102 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 1200217 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 1582420 15771421 ~ 15771864 (-)

Expression


Co-expression Network