LOC122352187


Basic Information

Item Value
gene id LOC122352187
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12730836 ~ 12730962 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251865.1
ACAGACTGAAAATTACCTCAGTTGTACCAATTGACTGAAGTAAGATAACTGTGCCAACAGAAAGTGGTACATATTTAGCTTATTGTCAGTCAATGTGACTCACAATGAAACCCATGTACCGACAGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251865.1 True 127 snoRNA 0.38 1 12730836 12730962

Neighbor

gene id symbol gene type direction distance location
dnah7 dnah7 coding upstream 111414 12562459 ~ 12619422 (+)
rubcnl rubcnl,LOC107709411,LOC107673128 coding upstream 170442 12554613 ~ 12560394 (+)
esd esd,LOC107675365,LOC107601075,LOC107709410,LOC107724032 coding upstream 212767 12514296 ~ 12518069 (+)
htr2aa htr2a,htr2aa,LOC107673120,LOC107709424,LOC107601068,LOC107724025,LOC107675342 coding upstream 223349 12482174 ~ 12507487 (+)
med4 med4,LOC107724027,LOC107673119,LOC107601074,LOC107709409,LOC107675337 coding upstream 274708 12453126 ~ 12456128 (+)
LOC122351844 sf3b1,LOC107731751,LOC107659892,LOC107719800,LOC107690614,LOC107595847,LOC107569635 coding downstream 46608 12777570 ~ 12787437 (+)
LOC122351846 ankrd44,LOC107719801,LOC107659898,LOC107595853 coding downstream 58328 12789290 ~ 12811475 (+)
tmeff2a tmeff2a,tmeff2,LOC107728299,LOC107670719,LOC107675359 coding downstream 304931 13035893 ~ 13090342 (+)
cavin2a sdpra,LOC107728296,LOC107670717,LOC107555844,LOC107675358,LOC107601077,LOC107718373 coding downstream 363190 13094152 ~ 13106211 (+)
trnas-cga_5 NA coding downstream 377453 13108415 ~ 13108496 (+)
G69706 NA non-coding upstream 5996 12665012 ~ 12724840 (+)
G69659 LOC107709425,LOC107724026 non-coding upstream 203963 12518289 ~ 12526873 (+)
G69625 NA non-coding upstream 273338 12457264 ~ 12457498 (+)
G69578 NA non-coding upstream 408304 12322251 ~ 12322532 (+)
G69539 NA non-coding upstream 530239 12199934 ~ 12200597 (+)
G69718 NA non-coding downstream 42372 12773334 ~ 12773850 (+)
G69723 NA non-coding downstream 106757 12837719 ~ 12840151 (+)
G69783 NA non-coding downstream 375318 13106280 ~ 13106757 (+)
G69789 NA non-coding downstream 376633 13107595 ~ 13107832 (+)
G69796 stk17b non-coding downstream 399136 13130098 ~ 13133839 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 101301 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 278471 12434988 ~ 12452365 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other upstream 575032 12046499 ~ 12155804 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other upstream 1240687 11465604 ~ 11490149 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 1700427 11021736 ~ 11030409 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 1336 12732298 ~ 12803408 (+)
G69755 NA other downstream 253906 12984868 ~ 12985978 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other downstream 558731 13289693 ~ 13304591 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 945201 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1856120 14587082 ~ 14589439 (+)

Expression


Co-expression Network