trnar-ccu_5


Basic Information

Item Value
gene id trnar-ccu_5
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5405903 ~ 5405975 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1319
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1319 True 73 tRNA 0.60 1 5405903 5405975

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 14717 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 19634 5377251 ~ 5386269 (+)
cd58 NA coding upstream 29117 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 257732 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 267753 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 117585 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 223147 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 410870 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 577914 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 596800 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 13524 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 64614 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 92343 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 108898 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 304239 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 61566 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 340880 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 360364 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 390119 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 428165 5834140 ~ 5914281 (+)
trnar-ccu_4 NA other upstream 602 5405229 ~ 5405301 (+)
ndufb3 ndufb3,LOC107752587,LOC107549774,LOC107549916,LOC107689503,LOC107720946 other upstream 263751 5140145 ~ 5142152 (+)
LOC122351471 NA other upstream 377264 5025563 ~ 5028639 (+)
c9h2orf76 zgc:101851,cunh2orf76,LOC107670315,LOC107747242,LOC107560816,LOC107752580,LOC107549781,LOC107689495 other upstream 387565 5015470 ~ 5018338 (+)
rbm45 rbm45,LOC107716918,LOC107752596 other upstream 688670 4709053 ~ 4717233 (+)
trnar-ccu_6 NA other downstream 1501 5407476 ~ 5407548 (+)
trnar-ccu_7 NA other downstream 2274 5408249 ~ 5408321 (+)
trnar-ccu_8 NA other downstream 3009 5408984 ~ 5409056 (+)
trnar-ccu_9 NA other downstream 3892 5409867 ~ 5409939 (+)
trnar-ccu_10 NA other downstream 5399 5411374 ~ 5411446 (+)

Expression


Co-expression Network