trnar-ccu_10


Basic Information

Item Value
gene id trnar-ccu_10
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5411374 ~ 5411446 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1324
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1324 True 73 tRNA 0.60 1 5411374 5411446

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 20188 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 25105 5377251 ~ 5386269 (+)
cd58 NA coding upstream 34588 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 263203 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 273224 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 112114 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 217676 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 405399 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 572443 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 591329 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 18995 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 70085 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 97814 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 114369 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 309710 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 56095 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 335409 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 354893 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 384648 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 422694 5834140 ~ 5914281 (+)
trnar-ccu_9 NA other upstream 1435 5409867 ~ 5409939 (+)
trnar-ccu_8 NA other upstream 2318 5408984 ~ 5409056 (+)
trnar-ccu_7 NA other upstream 3053 5408249 ~ 5408321 (+)
trnar-ccu_6 NA other upstream 3826 5407476 ~ 5407548 (+)
trnar-ccu_5 NA other upstream 5399 5405903 ~ 5405975 (+)
trnam-cau_28 NA other downstream 1086 5412532 ~ 5412603 (+)
trnar-ccu_11 NA other downstream 1309 5412755 ~ 5412827 (+)
trnam-cau_29 NA other downstream 1775 5413221 ~ 5413292 (+)
trnar-ccu_12 NA other downstream 1994 5413440 ~ 5413512 (+)
trnam-cau_30 NA other downstream 2262 5413708 ~ 5413779 (+)

Expression


Co-expression Network