CI01000000_04225109_04225608


Basic Information

Item Value
gene id CI01000000_04225109_04225608
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4225109 ~ 4226616 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_04225109_04225608.mRNA
ATTCCCTGCAGCATGTTCTGGGGGACTATGGACTGGTGAAACCCGTTCTTACTGATGCAGAAGGCCGCTTCCTGTCCCATGCGGTATCGGTTGGTCCAGCAGGTGGGCAGTTCCGTAGGCGCTGGAGAAGAGAGGCGGCATCAGCCGACCACGCCCACCATGAGTTCAAAGGAGACACGCTCGAGCAGCTCTACTACAACGTCACCGTCTTCGGCCGGGAGTTTCACCTGCGTCTGCGCCGCAACACACGCCTGGTGGCTCCCGGAGCCAAGATGGAGTGGCAGGAATCCGGCGGCATGCACTCCGAGCCTTTGAAGAGTGACTGCATGTATGTGGGTGACATTACGGACATACAGGGAGCATCAGTAGCTATTAGTAACTGCGACGGCCTGGTAAGTGGCCACATTGGCCTTCATTTGTGTGTGGTGTCCAGTATGTCCATTTACTTTACACAGTCCCTTAATGAAGCTAATTTGTTCGATAAAAATTGCAATCATTGAAAAGAAACTTTAATGAAAAATGAGCAGTTTATCTTTCCTATATTCAATCAACATGTAAATTAGGAGTTATGTACATACTGTATATTTGTAGGTTTTTTCATTTCAGATGCTCTCAAGTTGTATCCGAATACCAGGGGTGACATTTAGGGGGCAGAACCTGATTTCACCAAGTGCAACATATATTCCTGGTTCAACATCTTTGTTGATCCTGAAACAACATTCCAACCAACCAATCAGATTTTAGGGACAAGTTTACAGTTTATGTCAAGTTTAGGCTTACAACCAAGGTTAGGTGTTTCTACATCTGTGTTTTTCACCTATCATTTCCCTCTGATTTTAGAGATAACTTGTGGGTAGGGGTAGTTTTAGGGGTAGGGATATGGTTAGGACAAAATTTTCGGACCAGGATCCACAAAATATAATGACCCGGGAACATGTCTAATCAGGACATGCACTGAAGGTATAGTTCACCCAAAAATGACAATTTTGTCATCATTTACTCAACCTCATGTTGTTCCAAACCTGTATGAGTTTCTTTCTGAAGACAAAATATGATATTAAGAAAATATTTTGAAGAATGTTGGTAATCAGACAGATGGTAGCCATTGACTTCCATAGTAGGGGAAAAAAAAATACCATGGAAGTCAGTGGCTACCGTAAACTGTGTGTTTACCTACGTTCTTAAAAATATCTTCTTTTGTGTTCAGCAAAAGAAAGTAACTCATACAGGTTTGGAACAACTTGAGGGTGAGTAAAATTTTTGGGTGAACTATGCCGTTACGGGGAGACAACCAGGAATGAGGATGTGAACCTATAATGAGATGGTCTCATTAAGGTCCTTTATGGTGTAGCCTAAATGTTTTGTCCCAGGCCATGTGTTTTTAAGTGACAGTACTACCTAAAACTATCCGTGCCTTAAACTGAATATTGAAAAGTTGTTTTAGTGCATGCAGTAGTCACAGATTTTGCGAGTATCCTGGGATATTTCTAATACAAGCTGAAAGGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_04225109_04225608.mRNA True 1508 mRNA 0.43 1 4225109 4226616

Neighbor

gene id symbol gene type direction distance location
CI01000000_04165348_04197615 NA coding upstream 27288 4165285 ~ 4197821 (+)
CI01000000_04149689_04156988 CNOT6B, CNOT6, CNOT6A coding upstream 67632 4149689 ~ 4157477 (+)
CI01000000_04138020_04144928 NA coding upstream 80079 4138020 ~ 4147823 (+)
CI01000000_04090995_04093696 SCOC, SCOCB coding upstream 131364 4090547 ~ 4093745 (+)
CI01000000_04082293_04087343 NA coding upstream 137090 4082293 ~ 4088019 (+)
CI01000000_04355381_04356090 NA coding downstream 128765 4355381 ~ 4356143 (+)
CI01000000_04368179_04392483 NA coding downstream 141223 4367839 ~ 4392990 (+)
CI01000000_04451252_04452143 NA coding downstream 224514 4451130 ~ 4453011 (+)
CI01000000_04462428_04462831 NA coding downstream 235812 4462428 ~ 4463112 (+)
CI01000000_04547587_04562715 RXFP1 coding downstream 320971 4547587 ~ 4562837 (+)
G2427 NA non-coding upstream 23708 4201178 ~ 4201401 (+)
G2420 NA non-coding upstream 32755 4192124 ~ 4192354 (+)
G2294 NA non-coding upstream 105247 4118584 ~ 4119862 (+)
G2752 NA non-coding downstream 197100 4423716 ~ 4423954 (+)
G2755 NA non-coding downstream 198779 4425395 ~ 4425738 (+)
G2776 NA non-coding downstream 229376 4455992 ~ 4456314 (+)
G2780 NA non-coding downstream 236923 4463539 ~ 4463768 (+)
G2792 NA non-coding downstream 249941 4476557 ~ 4476765 (+)
G579 NA other upstream 2316301 1767917 ~ 1908808 (+)
G435 NA other upstream 2792255 1425121 ~ 1432854 (+)
G350 NA other upstream 3548172 671842 ~ 676937 (+)
G252 NA other upstream 3718037 503209 ~ 507072 (+)
G2774 NA other downstream 227162 4453778 ~ 4454232 (+)
G2850 NA other downstream 499370 4725986 ~ 4726482 (+)
G6811 NA other downstream 5978215 10204831 ~ 10321679 (+)
G6820 NA other downstream 6200607 10427223 ~ 10433018 (+)
G7018 NA other downstream 6751873 10978489 ~ 10980872 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008147 si:ch211-154c21.1 coding NC_007125.7 CM002898.2 48580369 ~ 48588422 (-)