trnar-ccu_40


Basic Information

Item Value
gene id trnar-ccu_40
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5437182 ~ 5437254 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1405
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1405 True 73 tRNA 0.60 1 5437182 5437254

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 45996 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 50913 5377251 ~ 5386269 (+)
cd58 NA coding upstream 60396 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 289011 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 299032 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 86306 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 191868 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 379591 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 546635 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 565521 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 44803 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 95893 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 123622 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 140177 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 335518 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 30287 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 309601 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 329085 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 358840 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 396886 5834140 ~ 5914281 (+)
trnam-cau_78 NA other upstream 148 5436963 ~ 5437034 (+)
trnam-cau_77 NA other upstream 347 5436764 ~ 5436835 (+)
trnar-ccu_39 NA other upstream 613 5436497 ~ 5436569 (+)
trnam-cau_76 NA other upstream 836 5436275 ~ 5436346 (+)
trnam-cau_75 NA other upstream 1035 5436076 ~ 5436147 (+)
trnam-cau_79 NA other downstream 395 5437649 ~ 5437720 (+)
trnar-ccu_41 NA other downstream 614 5437868 ~ 5437945 (+)
trnam-cau_80 NA other downstream 883 5438137 ~ 5438208 (+)
trnam-cau_81 NA other downstream 1081 5438335 ~ 5438406 (+)
trnam-cau_82 NA other downstream 1280 5438534 ~ 5438605 (+)

Expression


Co-expression Network