trnam-cau_80


Basic Information

Item Value
gene id trnam-cau_80
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5438137 ~ 5438208 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1408
agcagagtggcgcagcggaagcgtgctgggcccataacccagaggtcgatggatcgaaaccatcctctgcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1408 True 72 tRNA 0.60 1 5438137 5438208

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 46951 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 51868 5377251 ~ 5386269 (+)
cd58 NA coding upstream 61351 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 289966 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 299987 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 85352 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 190914 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 378637 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 545681 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 564567 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 45758 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 96848 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 124577 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 141132 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 336473 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 29333 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 308647 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 328131 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 357886 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 395932 5834140 ~ 5914281 (+)
trnar-ccu_41 NA other upstream 192 5437868 ~ 5437945 (+)
trnam-cau_79 NA other upstream 417 5437649 ~ 5437720 (+)
trnar-ccu_40 NA other upstream 883 5437182 ~ 5437254 (+)
trnam-cau_78 NA other upstream 1103 5436963 ~ 5437034 (+)
trnam-cau_77 NA other upstream 1302 5436764 ~ 5436835 (+)
trnam-cau_81 NA other downstream 127 5438335 ~ 5438406 (+)
trnam-cau_82 NA other downstream 326 5438534 ~ 5438605 (+)
trnar-ccu_42 NA other downstream 546 5438754 ~ 5438826 (+)
trnam-cau_83 NA other downstream 813 5439021 ~ 5439092 (+)
trnam-cau_84 NA other downstream 1012 5439220 ~ 5439291 (+)

Expression


Co-expression Network