trnar-ccu_43


Basic Information

Item Value
gene id trnar-ccu_43
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5439440 ~ 5439512 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1414
gccccagtggcctattggataaggcactggcctcctaagccagggattgtgggtttgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1414 True 73 tRNA 0.59 1 5439440 5439512

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 48254 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 53171 5377251 ~ 5386269 (+)
cd58 NA coding upstream 62654 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 291269 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 301290 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 84048 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 189610 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 377333 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 544377 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 563263 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 47061 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 98151 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 125880 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 142435 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 337776 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 28029 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 307343 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 326827 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 356582 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 394628 5834140 ~ 5914281 (+)
trnam-cau_84 NA other upstream 149 5439220 ~ 5439291 (+)
trnam-cau_83 NA other upstream 348 5439021 ~ 5439092 (+)
trnar-ccu_42 NA other upstream 614 5438754 ~ 5438826 (+)
trnam-cau_82 NA other upstream 835 5438534 ~ 5438605 (+)
trnam-cau_81 NA other upstream 1034 5438335 ~ 5438406 (+)
trnam-cau_85 NA other downstream 195 5439707 ~ 5439778 (+)
trnam-cau_86 NA other downstream 685 5440197 ~ 5440268 (+)
trnam-cau_87 NA other downstream 882 5440394 ~ 5440465 (+)
trnam-cau_88 NA other downstream 1079 5440591 ~ 5440662 (+)
trnam-cau_89 NA other downstream 1277 5440789 ~ 5440860 (+)

Expression


Co-expression Network