CI01000000_04451252_04452143


Basic Information

Item Value
gene id CI01000000_04451252_04452143
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4451130 ~ 4453011 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_04451252_04452143.mRNA
GCTTAAAAGAGGGGGCTGTGCCTGTTTTGTTTGCCTGGAATGACTACGCTCTACCGGCAGCCAGATCAAACGTCTGGGAGAGAACCCAATGGCCAGAGGATGAAGGAACTGAGGAGGAAAGTATGGATGTTGAAGTGTTGCTTCAGTGCCATGATTACGATGCCAAACCAGAACCGTCAGCTTTGGATATGGCTTGTGAGAAAATAGAGGTGCAACAACAGGTGATTGAAGAACTGCGAAAGAGGCTGGAAGAGGTTACACTGAAGCAGTCATTTGGCTTGGAGAAGTTTTTAGCATCGGACGATGACATCAGATTCTATACCAGATTTGCCAGCTACCGCCATCTACATGCATTTTGGAGAATGATTGAACCTGCAATGAGGAGACACCCAATTCCTGCACAACAACATCTCCTGACAAGGCAGCTGATCCACCTCGTTGACCGGTAGGCATGGCGCATACTACATCATGTGGTTACATGTTACAGTGTAATTTATACAGTGAGTAATATTAATAACATGTATGTAACACAGTTCGTATGATGTGGGAAGAAGGAGGCGGGAACCGGCGAACATTCAAACAATAAACTTTAATAAACTAAACAAAGAACAAAACAAAAGTAATGCCGGCAGACCCTCGCGGACGTCTGCTGGCCACACAAACATAATACAACAAAATAAAGTCCAGGCCTGGTCCTCTCTCGTCCTTCACTGTCGTCGCTCCTCCTTTTATGCTTCCAGAGCTCCTCCGTGAGAGACTCAAGGCCGGTGCACCTCACAGGTGGAGCTCGTTAACCCTCGCGTCACCGGCCTCGTCACAATGTACTTACTATAGGGTTAATTATGCATAATTACAGTTAAATTTTGCATAATTACATGCAACATGTCTAACAAGGACACTAGCTTTACCTATTATTTTGTTTTTTGTAACGCCACGCCAGCAGAGTGAGCCATCCCCTGAATACTGACTGAGATCTGCTCCCTCTGCTGCTTCTACCTTGACTTCCTGTTTGGTTACTAGCCAGAGAAGCTGCATCCATGCTTTGCGAAGTATTGCCATTTACACTGTCTTACTGAGTGTTTTCCTTGTTTTCTTGTTTGCTGACCATGTGTATGATTCTGCCTGTTTATCTTTGATTGTCTGGATTATCCCTTTCTGATTTGGCTGCCTGATTGGACTGATATCTGTGTTTGGACCTATTGCCTGCCTGCCACTCTGCCTTTGGATTCTCCCTTGTGTATGTTCACAGATTGGACTGATATACTGGTATTGACCCATTGCCTGTCTACGATATTTGTTTGTTTCTGTTGCTGCTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_04451252_04452143.mRNA True 1317 mRNA 0.45 2 4451130 4453011

Neighbor

gene id symbol gene type direction distance location
CI01000000_04368179_04392483 NA coding upstream 58140 4367839 ~ 4392990 (+)
CI01000000_04355381_04356090 NA coding upstream 94987 4355381 ~ 4356143 (+)
CI01000000_04225109_04225608 NA coding upstream 224514 4225109 ~ 4226616 (+)
CI01000000_04165348_04197615 NA coding upstream 253309 4165285 ~ 4197821 (+)
CI01000000_04149689_04156988 CNOT6B, CNOT6, CNOT6A coding upstream 293653 4149689 ~ 4157477 (+)
CI01000000_04462428_04462831 NA coding downstream 9417 4462428 ~ 4463112 (+)
CI01000000_04547587_04562715 RXFP1 coding downstream 94576 4547587 ~ 4562837 (+)
CI01000000_04576065_04586515 ETFDH coding downstream 123054 4576065 ~ 4586881 (+)
CI01000000_04661351_04667059 NA coding downstream 208340 4661351 ~ 4667087 (+)
CI01000000_04698746_04717749 RAPGEF2 coding downstream 245030 4698041 ~ 4718908 (+)
G2755 NA non-coding upstream 25392 4425395 ~ 4425738 (+)
G2752 NA non-coding upstream 27176 4423716 ~ 4423954 (+)
G2427 NA non-coding upstream 249729 4201178 ~ 4201401 (+)
G2420 NA non-coding upstream 258776 4192124 ~ 4192354 (+)
CI01000000_04138020_04144928 NA non-coding upstream 303307 4138020 ~ 4147823 (+)
G2776 NA non-coding downstream 2981 4455992 ~ 4456314 (+)
G2780 NA non-coding downstream 10528 4463539 ~ 4463768 (+)
G2792 NA non-coding downstream 23546 4476557 ~ 4476765 (+)
G2793 NA non-coding downstream 25974 4478985 ~ 4479194 (+)
G2795 NA non-coding downstream 31572 4484583 ~ 4484815 (+)
G579 NA other upstream 2542322 1767917 ~ 1908808 (+)
G435 NA other upstream 3018276 1425121 ~ 1432854 (+)
G350 NA other upstream 3774193 671842 ~ 676937 (+)
G252 NA other upstream 3944058 503209 ~ 507072 (+)
G2774 NA other downstream 767 4453778 ~ 4454232 (+)
G2850 NA other downstream 272975 4725986 ~ 4726482 (+)
G6811 NA other downstream 5751820 10204831 ~ 10321679 (+)
G6820 NA other downstream 5974212 10427223 ~ 10433018 (+)
G7018 NA other downstream 6525478 10978489 ~ 10980872 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G287664 LOC107554731 unknown NW_019172695.1 APWO02002293.1 306390 ~ 307501 (-)