trnar-ccu_45


Basic Information

Item Value
gene id trnar-ccu_45
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5441891 ~ 5441963 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1424
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1424 True 73 tRNA 0.60 1 5441891 5441963

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 50705 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 55622 5377251 ~ 5386269 (+)
cd58 NA coding upstream 65105 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 293720 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 303741 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 81597 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 187159 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 374882 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 541926 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 560812 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 49512 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 100602 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 128331 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 144886 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 340227 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 25578 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 304892 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 324376 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 354131 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 392177 5834140 ~ 5914281 (+)
trnam-cau_92 NA other upstream 148 5441672 ~ 5441743 (+)
trnam-cau_91 NA other upstream 345 5441475 ~ 5441546 (+)
trnam-cau_90 NA other upstream 544 5441276 ~ 5441347 (+)
trnar-ccu_44 NA other upstream 811 5441008 ~ 5441080 (+)
trnam-cau_89 NA other upstream 1031 5440789 ~ 5440860 (+)
trnam-cau_93 NA other downstream 195 5442158 ~ 5442229 (+)
trnam-cau_94 NA other downstream 393 5442356 ~ 5442427 (+)
trnar-ccu_46 NA other downstream 612 5442575 ~ 5442647 (+)
trnam-cau_95 NA other downstream 852 5442815 ~ 5442886 (+)
trnar-ccu_47 NA other downstream 1268 5443231 ~ 5443303 (+)

Expression


Co-expression Network