CI01000000_04462428_04462831


Basic Information

Item Value
gene id CI01000000_04462428_04462831
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4462428 ~ 4463112 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_04462428_04462831.mRNA
GGGGATGGAATAATAGTCCTACTGCAGGCCAGTTTCAGGGCATTTTCTGGCGTCTCATGGTCCGGTACGGTGTCTCTCCAAGCACTTCAGGGAACGTGGCACCACAGGATGAGGCCGTGTCACTATCAGCTGTTGAAATGTCATCTCTAGCAGTAGACGAGGCCAAGGAGCTTCCATCCCCTTTTGTAAATGTTTCTGCACTTTTGTGTGACCACAGCGACCTGCCAACTCGCTTTGGTAGCCTTGCGGACAATGCCCTTGTGTACATTTCTGGTTTTGTGGTGCGTCAGATTTTGAGAAAGCTTCCCTGTGGTGTGTGCCATGCTAGCTTGGTGGCAGATGCTGTACCTGGTTTATTTGACCAGAACTACCACTTACTTACTCTGAAAAACAATGGAGGCTGATGATTCCTTCCGAAGGTACAGTAAAAGTGATCAGATCAGTGGAGCGGTTTATTCGCCAGTCATCCTCCGGGAAAGCCGTCAGAGTGTCTTAGATCAGTCAGTTTGTCCAAGCTGAGATTGGTTCGAAGGATGTGTTTTTTCTCAAGGAGCACATTCAGGAAACACAGTTTGGAATTGACAACCATCATTTTTCTCTCTTGTCATTAGTTGTGTCTGTCTTTCACAAACTGAGGATGCACCACATTGCCAAGCTGAACACACAACGGAGTGGCAACTCAAGA

Function

NR:

description
THAP domain-containing protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_04462428_04462831.mRNA True 685 mRNA 0.48 1 4462428 4463112

Neighbor

gene id symbol gene type direction distance location
CI01000000_04451252_04452143 NA coding upstream 9417 4451130 ~ 4453011 (+)
CI01000000_04368179_04392483 NA coding upstream 69438 4367839 ~ 4392990 (+)
CI01000000_04355381_04356090 NA coding upstream 106285 4355381 ~ 4356143 (+)
CI01000000_04225109_04225608 NA coding upstream 235812 4225109 ~ 4226616 (+)
CI01000000_04165348_04197615 NA coding upstream 264607 4165285 ~ 4197821 (+)
CI01000000_04547587_04562715 RXFP1 coding downstream 84475 4547587 ~ 4562837 (+)
CI01000000_04576065_04586515 ETFDH coding downstream 112953 4576065 ~ 4586881 (+)
CI01000000_04661351_04667059 NA coding downstream 198239 4661351 ~ 4667087 (+)
CI01000000_04698746_04717749 RAPGEF2 coding downstream 234929 4698041 ~ 4718908 (+)
CI01000000_05008086_05008382 NA coding downstream 544891 5008003 ~ 5008641 (+)
G2776 NA non-coding upstream 6114 4455992 ~ 4456314 (+)
G2755 NA non-coding upstream 36690 4425395 ~ 4425738 (+)
G2752 NA non-coding upstream 38474 4423716 ~ 4423954 (+)
G2427 NA non-coding upstream 261027 4201178 ~ 4201401 (+)
G2420 NA non-coding upstream 270074 4192124 ~ 4192354 (+)
G2780 NA non-coding downstream 427 4463539 ~ 4463768 (+)
G2792 NA non-coding downstream 13445 4476557 ~ 4476765 (+)
G2793 NA non-coding downstream 15873 4478985 ~ 4479194 (+)
G2795 NA non-coding downstream 21471 4484583 ~ 4484815 (+)
G2845 NA non-coding downstream 106619 4569731 ~ 4569937 (+)
G2774 NA other upstream 8196 4453778 ~ 4454232 (+)
G579 NA other upstream 2553620 1767917 ~ 1908808 (+)
G435 NA other upstream 3029574 1425121 ~ 1432854 (+)
G350 NA other upstream 3785491 671842 ~ 676937 (+)
G252 NA other upstream 3955356 503209 ~ 507072 (+)
G2850 NA other downstream 262874 4725986 ~ 4726482 (+)
G6811 NA other downstream 5741719 10204831 ~ 10321679 (+)
G6820 NA other downstream 5964111 10427223 ~ 10433018 (+)
G7018 NA other downstream 6515377 10978489 ~ 10980872 (+)
G7153 NA other downstream 6781345 11244457 ~ 11245633 (+)

Expression


Co-expression Network