CI01000000_04547587_04562715 (RXFP1)


Basic Information

Item Value
gene id CI01000000_04547587_04562715
gene name RXFP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4547587 ~ 4562837 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_04547587_04562715.mRNA
GGATTTGTCCAATAACAGAATCAAAGCAATCCCTCCTGATCTTTTCGTCAATCTTGGAGACCTACTTCAGCTGAATATTTCATATAACCCCATCATGGACCTGCAGGTGGACCACTTTGACAAGCTGCATAAGTTAAAGTCACTGAGCATTGAGGGAATCGAAATTGGGAACATCCACAGAAGGATGTTTGAACCTCTCAAGAATCTGACTCACATCTACTTTAAAAAGTTTCAGTACTGTGGCTATGCGCCTCACGTCCGCAGCTGCAAGCCCAACACTGATGGCATCTCATCTTTCGAGGACCTTTTGGCAAACATTGTGCTGCGTGTCTTCGTCTGGGTTGTCTCGGCAACAACATGCTTCGGCAACATCTTTGTGATCTGCATGCGATCCTACATTCGCTCTGAGAACAAGCTCCACGCCATGTGCATCATCTCTTTATGCTGTGCAGATGGTCTGATGGGTGTCTACCTCTTCATGATTGGCGCCTATGACCTGAAGTTCAGAGGCGAGTATAACCGTCACGCTCAGGCCTGGATGGACAGTGTACCGTGTCAGGTGATTGGATCTCTAGCCATGCTGTCAACAGAGGTGTCAGTGCTGCTCCTCACATACCTCACCCTGGAGAAATACATTTGCATTGTCTACCCGTTCCGGTACCTGACCCCTGGCCGCAGACGCACCGTTACCATTTTGGTGGTCATCTGGATCTTGGGCTTTGTTATTGCTTTCCTGCCACTGGTCTTTAAAGGGGTTTTCAAAAACTTCTATGGAACCAATGGCGTTTGTTTCCCTTTGCACTCTGAGCAGCCAGAGACTCTTGGAGCCCAAGTCTACTCCATTGTGATCTTTCTGGGTCTCAATCTGGTGGCTTTTCTCATCATCGTACTGTCTTATGGAAGCATGTTTTACAATATCCAGAGAACAGGAACACAGACGACCAAATACAGCAACCACATTAAGAAAGAGCTGACCATTGCTAAACGCTTCTTCTCCATTGTCATCACCGATTCGCTGTGCTGGATTCCCATTTTCATCCTCAAGATTCTTTCACTAATGGAGGTCGAAATCCCCGGAACCATCAGCTCGTGGGTCGTCATCTTCATTCTGCCGATCAACAGCGCTCTGAACCCCATCTTGTACACGCTGACCACGCGGCCCTTTAAAGAGACACTGCTCCAGGTGTGGTCCAACTACAGGCAGCGGAGACCCCTACTTAGCAGCCATCCACCTCATCTGCCTTCCTTTACGTGGCAGGAAATGTGGCCTCTGCAAGAAAACAGCCAAACCCTTTGCTCCCCGGACTACCTGGCGCATCCGTCTGAAATGTCCAACAACTCTGGGACCACCCAGTTACTGCCCGTGGAGGGGTCGAACGGGACATGAAGTGGTCTGATGGGGTCCTGCTATCCGCATCACCTCATGTTTCACACTCATTCCAACAGGGCATACATTTTTTTGTATGTTTGTGGATGTCTCCATACATGTCCTCACTCAGAGCAGGGATA

Function

symbol description
rxfp1 Predicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in activation of adenylate cyclase activity; adenylate cyclase-activating G protein-coupled receptor signaling pathway; and hormone-mediated signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including brain; gill; male organism; pleuroperitoneal region; and terminal nerve. Orthologous to human RXFP1 (relaxin family peptide receptor 1).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04306 RXFP1, LGR7; relaxin family peptide receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_04547587_04562715.mRNA True 1509 mRNA 0.49 7 4547587 4562837

Neighbor

gene id symbol gene type direction distance location
CI01000000_04462428_04462831 NA coding upstream 84475 4462428 ~ 4463112 (+)
CI01000000_04451252_04452143 NA coding upstream 94576 4451130 ~ 4453011 (+)
CI01000000_04368179_04392483 NA coding upstream 154597 4367839 ~ 4392990 (+)
CI01000000_04355381_04356090 NA coding upstream 191444 4355381 ~ 4356143 (+)
CI01000000_04225109_04225608 NA coding upstream 320971 4225109 ~ 4226616 (+)
CI01000000_04576065_04586515 ETFDH coding downstream 13228 4576065 ~ 4586881 (+)
CI01000000_04661351_04667059 NA coding downstream 98514 4661351 ~ 4667087 (+)
CI01000000_04698746_04717749 RAPGEF2 coding downstream 135204 4698041 ~ 4718908 (+)
CI01000000_05008086_05008382 NA coding downstream 445166 5008003 ~ 5008641 (+)
CI01000000_05030001_05137032 FSTL5 coding downstream 467164 5030001 ~ 5137032 (+)
G2795 NA non-coding upstream 62772 4484583 ~ 4484815 (+)
G2793 NA non-coding upstream 68393 4478985 ~ 4479194 (+)
G2792 NA non-coding upstream 70822 4476557 ~ 4476765 (+)
G2780 NA non-coding upstream 83819 4463539 ~ 4463768 (+)
G2776 NA non-coding upstream 91273 4455992 ~ 4456314 (+)
G2845 NA non-coding downstream 6894 4569731 ~ 4569937 (+)
G2847 NA non-coding downstream 8520 4571357 ~ 4571594 (+)
G2850 NA non-coding downstream 163149 4725986 ~ 4726482 (+)
G2827 NA non-coding downstream 164151 4726988 ~ 4727323 (+)
G2858 NA non-coding downstream 178539 4741376 ~ 4741768 (+)
G2774 NA other upstream 93355 4453778 ~ 4454232 (+)
G579 NA other upstream 2638779 1767917 ~ 1908808 (+)
G435 NA other upstream 3114733 1425121 ~ 1432854 (+)
G350 NA other upstream 3870650 671842 ~ 676937 (+)
G252 NA other upstream 4040515 503209 ~ 507072 (+)
G6811 NA other downstream 5641994 10204831 ~ 10321679 (+)
G6820 NA other downstream 5864386 10427223 ~ 10433018 (+)
G7018 NA other downstream 6415652 10978489 ~ 10980872 (+)
G7153 NA other downstream 6681620 11244457 ~ 11245633 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008143 rxfp1 coding NC_007125.7 CM002898.2 48107216 ~ 48260744 (-)