trnar-ccu_55


Basic Information

Item Value
gene id trnar-ccu_55
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5448532 ~ 5448604 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1444
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1444 True 73 tRNA 0.60 1 5448532 5448604

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 57346 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 62263 5377251 ~ 5386269 (+)
cd58 NA coding upstream 71746 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 300361 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 310382 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 74956 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 180518 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 368241 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 535285 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 554171 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 56153 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 107243 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 134972 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 151527 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 346868 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 18937 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 298251 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 317735 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 347490 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 385536 5834140 ~ 5914281 (+)
trnam-cau_102 NA other upstream 145 5448316 ~ 5448387 (+)
trnar-ccu_54 NA other upstream 461 5447999 ~ 5448071 (+)
trnam-cau_101 NA other upstream 882 5447579 ~ 5447650 (+)
trnar-ccu_53 NA other upstream 1149 5447311 ~ 5447383 (+)
trnam-cau_100 NA other upstream 1369 5447092 ~ 5447163 (+)
trnam-cau_103 NA other downstream 396 5449000 ~ 5449071 (+)
trnar-ccu_56 NA other downstream 616 5449220 ~ 5449292 (+)
trnam-cau_104 NA other downstream 884 5449488 ~ 5449559 (+)
trnar-ccu_57 NA other downstream 1103 5449707 ~ 5449779 (+)
trnam-cau_105 NA other downstream 1370 5449974 ~ 5450045 (+)

Expression


Co-expression Network