trnar-ccu_57


Basic Information

Item Value
gene id trnar-ccu_57
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5449707 ~ 5449779 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1448
gccccagtggcctaatggataaggcactggcctcctaagccagggattgtgggttcgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1448 True 73 tRNA 0.60 1 5449707 5449779

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 58521 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 63438 5377251 ~ 5386269 (+)
cd58 NA coding upstream 72921 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 301536 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 311557 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 73781 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 179343 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 367066 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 534110 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 552996 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 57328 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 108418 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 136147 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 152702 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 348043 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 17762 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 297076 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 316560 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 346315 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 384361 5834140 ~ 5914281 (+)
trnam-cau_104 NA other upstream 148 5449488 ~ 5449559 (+)
trnar-ccu_56 NA other upstream 415 5449220 ~ 5449292 (+)
trnam-cau_103 NA other upstream 636 5449000 ~ 5449071 (+)
trnar-ccu_55 NA other upstream 1103 5448532 ~ 5448604 (+)
trnam-cau_102 NA other upstream 1320 5448316 ~ 5448387 (+)
trnam-cau_105 NA other downstream 195 5449974 ~ 5450045 (+)
trnam-cau_106 NA other downstream 1073 5450852 ~ 5450923 (+)
trnar-ccu_58 NA other downstream 1292 5451071 ~ 5451143 (+)
trnar-ccu_59 NA other downstream 2855 5452634 ~ 5452706 (+)
trnar-ccu_60 NA other downstream 3538 5453317 ~ 5453389 (+)

Expression


Co-expression Network