trnar-ccu_58


Basic Information

Item Value
gene id trnar-ccu_58
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5451071 ~ 5451143 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1451
gccccagtggcctattggataaggcactggcctcctaagccagggattgtgggtttgagtcccatctggggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1451 True 73 tRNA 0.59 1 5451071 5451143

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 59885 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 64802 5377251 ~ 5386269 (+)
cd58 NA coding upstream 74285 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 302900 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 312921 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 72417 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 177979 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 365702 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 532746 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 551632 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 58692 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 109782 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 137511 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 154066 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 349407 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 16398 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 295712 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 315196 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 344951 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 382997 5834140 ~ 5914281 (+)
trnam-cau_106 NA other upstream 148 5450852 ~ 5450923 (+)
trnam-cau_105 NA other upstream 1026 5449974 ~ 5450045 (+)
trnar-ccu_57 NA other upstream 1292 5449707 ~ 5449779 (+)
trnam-cau_104 NA other upstream 1512 5449488 ~ 5449559 (+)
trnar-ccu_56 NA other upstream 1779 5449220 ~ 5449292 (+)
trnar-ccu_59 NA other downstream 1491 5452634 ~ 5452706 (+)
trnar-ccu_60 NA other downstream 2174 5453317 ~ 5453389 (+)
trnam-cau_107 NA other downstream 2442 5453585 ~ 5453656 (+)
trnam-cau_108 NA other downstream 2639 5453782 ~ 5453853 (+)
trnar-ccu_61 NA other downstream 2859 5454002 ~ 5454074 (+)

Expression


Co-expression Network