trnam-cau_108


Basic Information

Item Value
gene id trnam-cau_108
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5453782 ~ 5453853 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1455
agcagagtggcgcagcggaagcgtgctgggcccataacccagaggtcgatggatcgaaaccatcctctgcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1455 True 72 tRNA 0.60 1 5453782 5453853

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 62596 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 67513 5377251 ~ 5386269 (+)
cd58 NA coding upstream 76996 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 305611 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 315632 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 69707 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 175269 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 362992 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 530036 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 548922 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 61403 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 112493 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 140222 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 156777 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 352118 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 13688 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 293002 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 312486 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 342241 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 380287 5834140 ~ 5914281 (+)
trnam-cau_107 NA other upstream 126 5453585 ~ 5453656 (+)
trnar-ccu_60 NA other upstream 393 5453317 ~ 5453389 (+)
trnar-ccu_59 NA other upstream 1076 5452634 ~ 5452706 (+)
trnar-ccu_58 NA other upstream 2639 5451071 ~ 5451143 (+)
trnam-cau_106 NA other upstream 2859 5450852 ~ 5450923 (+)
trnar-ccu_61 NA other downstream 149 5454002 ~ 5454074 (+)
trnam-cau_109 NA other downstream 416 5454269 ~ 5454340 (+)
trnar-ccu_62 NA other downstream 635 5454488 ~ 5454560 (+)
trnam-cau_110 NA other downstream 902 5454755 ~ 5454826 (+)
trnar-ccu_63 NA other downstream 1517 5455370 ~ 5455442 (+)

Expression


Co-expression Network