trnam-cau_111


Basic Information

Item Value
gene id trnam-cau_111
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5456772 ~ 5456843 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1462
agcagagtggcgcagcggaagcgtgctgggcccataacccagaggtcgatggatcgaaaccatcctctgcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1462 True 72 tRNA 0.60 1 5456772 5456843

Neighbor

gene id symbol gene type direction distance location
si:dkey-11f4.14 NA coding upstream 65586 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 70503 5377251 ~ 5386269 (+)
cd58 NA coding upstream 79986 5369603 ~ 5376786 (+)
LOC122351829 LOC107670324,LOC107577992,LOC107578707 coding upstream 308601 5142408 ~ 5148171 (+)
usp37 usp37,LOC107670323,LOC107549772 coding upstream 318622 5128137 ~ 5138150 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding downstream 66717 5523560 ~ 5527595 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding downstream 172279 5629122 ~ 5732070 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 360002 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 527046 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 545932 6002775 ~ 6004352 (+)
G67979 NA non-coding upstream 64393 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 115483 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 143212 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 159767 5296655 ~ 5297005 (+)
G67888 NA non-coding upstream 355108 5101359 ~ 5101664 (+)
G68013 NA non-coding downstream 10698 5467541 ~ 5562170 (+)
G68056 NA non-coding downstream 290012 5746855 ~ 5764874 (+)
G68058 NA non-coding downstream 309496 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 339251 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 377297 5834140 ~ 5914281 (+)
trnar-ccu_64 NA other upstream 197 5456503 ~ 5456575 (+)
trnar-ccu_63 NA other upstream 1330 5455370 ~ 5455442 (+)
trnam-cau_110 NA other upstream 1946 5454755 ~ 5454826 (+)
trnar-ccu_62 NA other upstream 2212 5454488 ~ 5454560 (+)
trnam-cau_109 NA other upstream 2432 5454269 ~ 5454340 (+)
trnar-ccu_65 NA other downstream 348 5457191 ~ 5457263 (+)
trnam-cau_112 NA other downstream 615 5457458 ~ 5457529 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other downstream 427084 5883927 ~ 5885753 (+)
LOC122351907 LOC107670338,LOC107721263 other downstream 506041 5962884 ~ 5973123 (+)
si:ch211-167j6.3 NA other downstream 2884452 8341295 ~ 8342751 (+)

Expression


Co-expression Network