trnal-caa


Basic Information

Item Value
gene id trnal-caa
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13423714 ~ 13423826 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1467
GTCAggatggccgagtggtctaaggcgccagactcaagTTCTGGTCTCcgaatggaggcgtgggttcgaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1467 True 84 tRNA 0.57 2 13423714 13423826

Neighbor

gene id symbol gene type direction distance location
wdfy2 wdfy2,LOC107725248,LOC107685482,LOC107723695,LOC107695578 coding upstream 3863 13411787 ~ 13419851 (+)
serpine3 serpine3,LOC107555035,LOC107567776,LOC107725220,LOC107695567 coding upstream 23602 13386660 ~ 13400112 (+)
LOC122352182 LOC107685564,LOC107723675,LOC107725243,LOC107695580 coding upstream 37221 13371593 ~ 13386493 (+)
asb18 asb18,LOC107723656,LOC107686685,LOC107567774 coding upstream 52787 13363066 ~ 13370927 (+)
LOC122351698 col6a3,LOC107685998,LOC107723650,LOC107695585,LOC107725234 coding upstream 75141 13260261 ~ 13348573 (+)
esyt3 esyt3,LOC107685117,LOC107723684,LOC107695576,LOC107555067,LOC107725232 coding downstream 1364 13425190 ~ 13433984 (+)
parp9 NA coding downstream 20429 13444255 ~ 13449599 (+)
ndufa10 ndufa10,LOC107684997,LOC107567779 coding downstream 32289 13456115 ~ 13460454 (+)
sh3bp4 sh3bp4,LOC107684539,LOC107555364,LOC107723680,LOC107658300,LOC107555062 coding downstream 185601 13609427 ~ 13622795 (+)
arl4cb arl4cb,arl4c,LOC107658299 coding downstream 200650 13624476 ~ 13626143 (+)
G69796 stk17b non-coding upstream 289875 13130098 ~ 13133839 (+)
G69789 NA non-coding upstream 315882 13107595 ~ 13107832 (+)
G69783 NA non-coding upstream 316957 13106280 ~ 13106757 (+)
G69723 NA non-coding upstream 583563 12837719 ~ 12840151 (+)
G69718 NA non-coding upstream 649864 12773334 ~ 12773850 (+)
G69985 NA non-coding downstream 91863 13515689 ~ 13518237 (+)
G70021 NA non-coding downstream 245280 13669106 ~ 13669444 (+)
G70029 map3k19,LOC107684057,LOC107723646,LOC107555330,LOC107725236,LOC107658294 non-coding downstream 261970 13685796 ~ 13686466 (+)
LOC122351436 LOC107555330 non-coding downstream 262839 13686665 ~ 13689033 (+)
G70032 NA non-coding downstream 268388 13692214 ~ 13692487 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 119123 13289693 ~ 13304591 (+)
G69755 NA other upstream 437736 12984868 ~ 12985978 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other upstream 620306 12732298 ~ 12803408 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other upstream 794179 12627535 ~ 12629535 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other upstream 971349 12434988 ~ 12452365 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other downstream 252337 13676163 ~ 13684835 (+)
LOC122351767 NA other downstream 1163256 14587082 ~ 14589439 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other downstream 1977301 15401127 ~ 15425361 (+)
LOC122351678 hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369 other downstream 2284375 15708201 ~ 15715901 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 2310744 15734570 ~ 15789702 (+)

Expression


Co-expression Network