G6870


Basic Information

Item Value
gene id G6870
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26760004 ~ 26764480 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU10053
TAATTATGATAGATTTTAACATAATCTGTAGAAGTGACAgcaatttattgttaaaaagtgAATTAATATATTAGCCAATCTTCAGGTTTGCAATAATTGCAAACCTCACACAAAATGAAGATATAAGAGTTTGTGTTTCTGAAGAACAAGTGAgaacatgtacacacacacacacacacacacacacacacacacacaccaaggaTACGACCCTCATGCCTCTCTCTATGGGGTCAGTGATGAGGAGACCTCGAGGAGCGTAAACCTTCTCATTCTGCTCCTGAATGTACCGCGAGATCTTCTTCAGCacctgcacgcacacacacacacacacacacacacaaggtgcCCTTTTAATCATCACCATCAGTTTTATCCGTCACAGTTAGCATTTTTCCATGATACTTCAGGAGTTTTATCTGGCTCTGTACCTTCTCGTAGCGTGTCTCGATGCACAGGAAGATGAGGTAAACCGTGAGGCAGGCCAGACATCCCTCGAGGTACGACTGGCCTCCGATCTTCTCCGCCTCTGCATAGTAATTATTCAGCGTCTTCACCGTGTCCTCAAACAGCGTCCGCTCGATCTGACCAATCGGGTGCAAGGACAAGATGAGTCAGCCAATCGGAGAGCACGGGGAGTTCACTCGAGGACATAGCATGGCAAAAACCAATGGGTTTGATCAAAAACAGACTGATATTAGTCATCACGTGAGAATGCTTGCTTGCATCAAGATAATTAAAGACAGAAAGCTCTACATGTTAAAGCCCCCTTCCCCGTGGTGTCCTCAGCACGTCTTTGCTGGGCGCCCGTAACACTTTTAAACAGCTCTATTATCAGCTCTATTAGCAGCTCATTATGTGTGTTGTGTGGAGTTTGCGCACTCAGCAGCGCTTTTGCTGAAGAGCAGGGTTTCTCTGAGTGAAGAGCCTTATTCTCTTCCTCTCCTTTTTACTTGCGTTGTCTCTCTTTTGTtccgccacacacacacacacacacacacacacacacacatacacacacacacacacatacacacacacctacacacacacacacctacacacacacgtacacacacacacctacgcacgcacacacacgcacgcacgcacatgcacacacacctacacacacacacttaccctGCTGTCTAACTCGGAGGGGAACTTGGTCTGGAACTTGCAGACGGTGCCATCCGTGTAGTCTCTCTGAATGAAGACCTTATTGGCCAGAGATGCGCTGTGTCTCAGCTCCTGAAGGTTATGGAACTACAGCGGAGGACGAGAGAGGATATAATCATAAATGCAGCGTCCTTGAGACACTTCATCAGTGTAGCGCTAGCTCACGTTATCGTCTTTATCTCAGCGTAACGCGGCGATGCTTCTGTCGTTAACTAGTATCATCATCAGTTGCTCATATATTAACGCAGCGTCATTAGCTCACAGAGTAATGCGGTGCTCATCGTCATCACCTTATAGAAAAGTGCAGCGACTTCATCATCACTGTGATGTCATTATCTCAGAGTGCTTCCGTGATGTTATCTTAATTATCAGAGCAATTAAGCGATGCTGTCATTGCCTCTAATTAACGATGCCACTAACCATTATCTCATAGACGGCCTTATCTCAGAATAATAATGCAGAAATACCACCACCTCATCGACGCAGCGATGTAATTGCAGTTAATTTGAGTAATGCATTGAGGTCACCGTCTGAAAGCAGTGCAGCGATGCTGTCATCATCTCATGAAGTCACAGCAATGATAAGCAACACAGTGGTTTTGTCATTATCTCATGGAGTAATGCCACACTCTCATTGTCTCGTAGTAGTAAAGTAGCATCGGTTTGCGTTAAAGCAGTGATGCTGCCGTTTAACGCAGCGGCGTTTTCTCCATCCATCATCATCACCGCATTGCTCCGAGCTTTTGGCAGCAATGCATTCGGCGAAGGCTCAAGCTAATGCAGCGCCGGCGTCGTTAACGTACAGAGCGATCCAGGGATGACCTTATCATTTAATGGACACTTTGTTGCCTGTATGCACGCGCACCCACATCAGAGCGACTGGCcatctgtcacacacacacacacacacaccagcccTTCCATCCCCCAGTCCTCGCCGGGTTCCCACCTCTAAACGTTCATACACTGGGAGACTATAATAAGAAAGCGCGTGGCTTGGCCGACTACCGCGCAGACTGACATCACCGCACGTTATTCTTTCTCTCCAGACGTCTGGAGGTCAGATGAAGACCGCTCCGGCTGGTATAATTACCCGGGCGGCCCCGGCGACCTGTTATTTAAAAACCTGCTTGGTTTTAGCAGCAGGGCCCGCCGGCGAGAGACGGCACGCACACAGCTCTTCGGGTCGATGCCTGGCGCTCAGCGTTAGCGCCGGATCTCAGGAATCCTTGCACAGCTCAGATAAAAGGCATGTCCGGTGTCAAATGATGCACAACACGCCATTTACCTGTTGGACtcctcacaaacacacccagAAGGATCTACACTTGAGTATAAAGCACTGTATGCAATGTGCTAATTCACGTTAAACATACTggcaaacttttaattttaggaCATCATGTTTTTAAGCACTTCATATTTCAATGTAAATACCATGCATATATACCAACATTCTAATGGTTTGCGCTACAAAAACTAACAACTATTAAAACGAGTACAAAATCTATCTTACATGTTGTTTTCTATAGCTTTTCTTCAGCAGGATATCACGGTACCCTCTCCTATCACCGTTACCGACACTTTAGCGCCGGTAAACCGAGCCTAAACGTTCCGGGCTGTTGTTACTAAACGCCTCGTTAATTATGCATGCATAGCCGCTCTCGGTAACTGTCTCAGAAAGATGAGAGACACTGTTACCGACTCCCGCGAGCACAACCGATCGATCGCGAGGAGACGATCGTTTAACACGCGCTCACCGCTGATAGCAAACATATCAAAACACGATCCGCTCGTCCCGCTCACAACCCCCCGAGGAGCGCGCTTGTTTTCCGCCCGCACGAGATTAAACAAAGAGGTCTCGCGCTCGAACCGCAACGTCACGCGCGCGCGTTCAAGGTTACTCGGCGGGACACGCGTTCAACTCCAAAATAAACCCGCGAAGTCGCAGATTGCGGCACGCGAAcagatttaaaacactttttaaaaacggagtaattaaaaaaaaaataaacgataTCCGAGCATCTTACAGATTCGTGGCAGTACGGGAGTTTTGTCCGGTCCGCCGCTGTCCGCGGTGCTGAAATCATTCCTGATCCGGTCACCGATGAAAGGGTCGGGCAAACGCTCTATCTGCTTTCACTAAAAGAGCTTATCGGGCCGCGGACAGCCGCTTTTATCCTCTTTGATGTCCAGCTGCGCGAGCTGCTACGTCACGCGCGCGCTGCTCGCGCTCATTTGAATACGGCGCCGGAGCCTTCTGACCACAAACACGAGCCCTTGTCATCTGGTGTTGTGAACACAGAGCATTGAGAACACGTCCTTTTATCGATCTAAGCATCCGATCTGAGCGACAGACAGACAATCgagacactctgtgtcagagaTAAACAAGTCCATATATCTGAGAACACTtctgaaaaagcttattttgtgttcttgtaaCATTCATCACAGCAAAACCTATTCAAGAGAGtaatataagtaatattatTTAGCTACACGCACTTTGGCTCGTTACTTGCGTGTAATTACGCatcatttattactattataatagcAAGGACATGCAACGTGTAATCAGTAAATCAATACATGTGGggtattactttttactttgacagtatgacagtaaaataaaataactgctgATCAGTGTAAGCATTACTTAGTGACCGTTCACCTAAAATAAATAGGTAGCTCACTCTCTGCCTGATCACACCCTTTAAATGGTGCTAGCCTAGTATAGTTAGTTAAACTGAGTCATAATAAAGAACACGTGATTAAATGGCAATTAAGATTACCACGTTATGACactatctgtctatctacctatctatctatctacctatctatctatctatctatctatctatctatctatctatctatctacctatctatctatatatctgtctgtctgtctgtgtgtctatctatctatctatcatctatctatctatatatatatcagtctgtctgtctatctatctatcatctatctatctatctatctatctgtctgtctgtctgtctgtctatctatctgtctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10053 True 4237 lncRNA 0.53 2 26760004 26764480

Neighbor

gene id symbol gene type direction distance location
avpi1 LOC107730030,LOC107700857,LOC107598489,LOC107703811 coding downstream 20964 26734472 ~ 26739040 (-)
cdc25d LOC107598551,LOC107700789,LOC107729831 coding downstream 32572 26722519 ~ 26727432 (-)
pgam1b pgam1b,pgam1a,pgam1,LOC107700858,LOC107598490,LOC107703810,LOC108258456 coding downstream 38175 26718192 ~ 26721829 (-)
exosc1 exosc1,LOC107700859,LOC107598491 coding downstream 42303 26712846 ~ 26717701 (-)
tekt4 tekt4,LOC107729531,LOC107598552,LOC107709630 coding downstream 75531 26680051 ~ 26684473 (-)
crtac1a crtac1a,LOC107700849,LOC107598482,LOC107747162 coding upstream 2806 26767286 ~ 26773820 (-)
LOC122350383 khsrp,LOC107703803,LOC107594262,LOC107700847,LOC107598477 coding upstream 13987 26778467 ~ 26786900 (-)
slc25a23a slc25a23a,LOC107747161,LOC107594260,LOC107703801 coding upstream 22828 26787308 ~ 26798014 (-)
vps54 vps54,LOC107709616,LOC107700845,LOC107598476 coding upstream 38928 26803408 ~ 26819171 (-)
peli1a peli1a,LOC107700844,LOC107747159,LOC107598475,LOC107709617,LOC107594259,LOC107703798 coding upstream 56593 26821073 ~ 26833754 (-)
G6874 NA non-coding downstream 1712 26754732 ~ 26758292 (-)
G6873 NA non-coding downstream 11048 26748723 ~ 26748956 (-)
G6827 gprc5b,gprc5bb,LOC107729503,LOC107578286,LOC107700862,LOC107598492,LOC107709629,LOC107703814 non-coding downstream 53176 26653242 ~ 26706828 (-)
G6834 NA non-coding downstream 69514 26689354 ~ 26690490 (-)
G6801 NA non-coding downstream 246084 26513569 ~ 26513920 (-)
G6856 LOC107736226,LOC107598471,LOC107700840 non-coding upstream 45468 26809948 ~ 26865737 (-)
G6887 NA non-coding upstream 168652 26933132 ~ 26942207 (-)
G6923 NA non-coding upstream 229958 26994438 ~ 26994699 (-)
G6926 NA non-coding upstream 242167 27006647 ~ 27007143 (-)
G6927 NA non-coding upstream 243023 27007503 ~ 27007987 (-)
LOC122353745 slc9a3r2,LOC107729606 other downstream 236602 26454250 ~ 26523402 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other downstream 342107 26416859 ~ 26417897 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other downstream 624518 26130788 ~ 26135486 (-)
patl1 patl1,LOC107598520,LOC107657997,LOC107594300,LOC107703847,LOC107746119 other downstream 896217 25831324 ~ 25863787 (-)
LOC122353196 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 1044300 25714102 ~ 25715704 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other upstream 37430 26801910 ~ 26802954 (-)
si:ch211-286b5.5 NA other upstream 153189 26917669 ~ 26920034 (-)
LOC122349164 NA other upstream 220064 26984544 ~ 26992582 (-)
LOC122344379 NA other upstream 431758 27196238 ~ 27202628 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other upstream 475844 27240324 ~ 27255067 (-)

Expression


Co-expression Network