CI01000000_04728056_04730605


Basic Information

Item Value
gene id CI01000000_04728056_04730605
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 4727845 ~ 4730771 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_04728056_04730605.mRNA
AGACAAAAACAGCAAGCTTTCTGTTAGTGTCACTAAACTCGTCAATTAAAGTAACATCAATATAATATTTAGATATAATTTTTAGATGTGCTTTGTCTAAATGTTTTTTCATTGTTATTTCAGGTATTAATTAATCCTGGCTGATTTCAGTGTTCTTTGAGAAACAATGGCGTTCTGGACTGTCTGTGTGTCTCTCTGTCTTCTCTTTGCTCTGAATGCTTCAGCTTGTCAGAGTGGGTGGACTCAACATGGAAAGAGATGCTTCAAGGTTTTTAACCACGCAATGATCTGGAAGGATGCAGAGATGACATGCTTGGACCACGGTGGGAACCTTGCATCTGTACACTGTCACGAGGAGAACGCCTTCATAAAACGCTTGATCTCAAGTTCAGAATCATTCTGGATAGGAGGCAATGATGCTGTTTCAGAGGGAACATGGTTCTGGAGTGATGGGTCCAAAATGAATGTCCAACTTTGGAACCCCGGAGAACCCAATAACTCAGGCACTACTGAGCATTGTATTGAGATGAACCATGGAGGTGCAAAAAATTGGAATGACCAAGAATGTACAAACAAGTTACCTTTTGTGTGTGCCAGTGCTGATTTGAGCACTTCCTTTACATGCCCATGTTAAATCAGAAATATCATGCCCATTCTAAATGATTTTCTAATAGCTACTTAAAACATTTTTTAATGGTATCTTTGACAAGTTAAGTTGCATGATTATTGATAGTCTACTACATTATCTGCATATTTTCCCTTCACATTTTAACTGCAGTATCACCCAGGGTCATCACCATTCCCATACAGTGCAAATGTAACCAATATCAACTGAACTCAATAAA

Function

NR:

description
C-lectin-B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_04728056_04730605.mRNA True 845 mRNA 0.38 5 4727845 4730771

Neighbor

gene id symbol gene type direction distance location
CI01000000_04597720_04599733 NA coding downstream 127676 4597518 ~ 4600169 (-)
CI01000000_04589952_04595231 PPID coding downstream 132064 4589952 ~ 4595781 (-)
CI01000000_04587327_04589208 NA coding downstream 138637 4586959 ~ 4589208 (-)
CI01000000_04568874_04570653 NA coding downstream 156463 4568574 ~ 4571382 (-)
CI01000000_04121742_04131508 MMP17B coding downstream 595977 4120796 ~ 4131868 (-)
CI01000000_04924131_04926561 NA coding upstream 193287 4924058 ~ 4926766 (-)
CI01000000_04986976_04998622 NA coding upstream 255938 4986709 ~ 4999019 (-)
CI01000000_05286804_05288152 NA coding upstream 556017 5286788 ~ 5288214 (-)
CI01000000_05311908_05314253 NA coding upstream 579970 5310741 ~ 5314256 (-)
CI01000000_05380329_05386853 ANXA5A coding upstream 649284 5380055 ~ 5386853 (-)
G3007 NA non-coding downstream 494 4726990 ~ 4727351 (-)
G3006 NA non-coding downstream 1400 4725986 ~ 4726445 (-)
G3005 NA non-coding downstream 2383 4725251 ~ 4725462 (-)
G2937 NA non-coding downstream 48402 4622557 ~ 4679443 (-)
G2892 NA non-coding downstream 179128 4545423 ~ 4548717 (-)
G3012 NA non-coding upstream 10605 4741376 ~ 4741599 (-)
G3023 NA non-coding upstream 66029 4796800 ~ 4797046 (-)
G3026 NA non-coding upstream 84903 4815674 ~ 4815882 (-)
G3034 NA non-coding upstream 99740 4830511 ~ 4830734 (-)
G3060 NA non-coding upstream 152639 4883410 ~ 4883632 (-)
G2730 NA other downstream 337693 4386383 ~ 4390152 (-)
CI01000000_04079738_04081018 MIF other downstream 646728 4078121 ~ 4081117 (-)
G2484 NA other downstream 1154291 3570066 ~ 3573554 (-)
CI01000000_03564077_03564373 NA other downstream 1160754 3562887 ~ 3567571 (-)
CI01000000_03245643_03246684 NA other downstream 1481130 3245134 ~ 3246721 (-)
CI01000000_05465020_05466303 NA other upstream 733287 5464058 ~ 5466516 (-)
G3650 NA other upstream 809692 5540463 ~ 5540881 (-)
G3716 NA other upstream 1269636 6000407 ~ 6000769 (-)
G3931 NA other upstream 1426242 6157013 ~ 6403525 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other upstream 5673557 10407395 ~ 10409950 (-)

Expression


Co-expression Network