Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000000_04924131_04926561 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 4924058 ~ 4926766 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Retrovirus polyprotein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000000_04924131_04926561.mRNA | True | 1667 | mRNA | 0.45 | 4 | 4924058 | 4926766 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_04728056_04730605 | NA | coding | downstream | 193287 | 4727845 ~ 4730771 (-) |
| CI01000000_04597720_04599733 | NA | coding | downstream | 323889 | 4597518 ~ 4600169 (-) |
| CI01000000_04589952_04595231 | PPID | coding | downstream | 328277 | 4589952 ~ 4595781 (-) |
| CI01000000_04587327_04589208 | NA | coding | downstream | 334850 | 4586959 ~ 4589208 (-) |
| CI01000000_04568874_04570653 | NA | coding | downstream | 352676 | 4568574 ~ 4571382 (-) |
| CI01000000_04986976_04998622 | NA | coding | upstream | 59943 | 4986709 ~ 4999019 (-) |
| CI01000000_05286804_05288152 | NA | coding | upstream | 360022 | 5286788 ~ 5288214 (-) |
| CI01000000_05311908_05314253 | NA | coding | upstream | 383975 | 5310741 ~ 5314256 (-) |
| CI01000000_05380329_05386853 | ANXA5A | coding | upstream | 453289 | 5380055 ~ 5386853 (-) |
| CI01000000_05409025_05413963 | TMEM33.L, TMEM33 | coding | upstream | 481473 | 5408239 ~ 5414411 (-) |
| G3072 | NA | non-coding | downstream | 14652 | 4909126 ~ 4909406 (-) |
| G3060 | NA | non-coding | downstream | 40426 | 4883410 ~ 4883632 (-) |
| G3034 | NA | non-coding | downstream | 93324 | 4830511 ~ 4830734 (-) |
| G3026 | NA | non-coding | downstream | 108176 | 4815674 ~ 4815882 (-) |
| G3023 | NA | non-coding | downstream | 127012 | 4796800 ~ 4797046 (-) |
| G3119 | NA | non-coding | upstream | 37022 | 4963788 ~ 4964127 (-) |
| G3129 | NA | non-coding | upstream | 45944 | 4972710 ~ 4972985 (-) |
| G3426 | NA | non-coding | upstream | 110818 | 5037584 ~ 5053933 (-) |
| G3457 | NA | non-coding | upstream | 216563 | 5143329 ~ 5143559 (-) |
| G3462 | NA | non-coding | upstream | 253741 | 5180507 ~ 5182548 (-) |
| G2730 | NA | other | downstream | 533906 | 4386383 ~ 4390152 (-) |
| CI01000000_04079738_04081018 | MIF | other | downstream | 842941 | 4078121 ~ 4081117 (-) |
| G2484 | NA | other | downstream | 1350504 | 3570066 ~ 3573554 (-) |
| CI01000000_03564077_03564373 | NA | other | downstream | 1356967 | 3562887 ~ 3567571 (-) |
| CI01000000_03245643_03246684 | NA | other | downstream | 1677343 | 3245134 ~ 3246721 (-) |
| CI01000000_05465020_05466303 | NA | other | upstream | 537292 | 5464058 ~ 5466516 (-) |
| G3650 | NA | other | upstream | 613697 | 5540463 ~ 5540881 (-) |
| G3716 | NA | other | upstream | 1073641 | 6000407 ~ 6000769 (-) |
| G3931 | NA | other | upstream | 1230247 | 6157013 ~ 6403525 (-) |
| CI01000000_10407402_10409508 | UBL3B, UBL3.S, UBL3 | other | upstream | 5477562 | 10407395 ~ 10409950 (-) |
