G7654 (LOC107662685)


Basic Information

Item Value
gene id G7654
gene name LOC107662685
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29470716 ~ 29474851 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU11404
GCTGGCAGCTCTGGAATCCCTGTCACCTGACcagaaagcagagctgctgctgGATCCATCCACCGGTGCTCTTGAAAATGTGACCGTGGTGAAAGAGGTGCTGAGCAGCATTGTAAAATCCCCAGAAGGGCAGCAGCTAGAGAAATTCTTTGAAACGTTCGTGGAGGTCAGCAAGGAGAAACACATCCCCTACATCAGCAACGCTGAGGTCCGGGACGCAATACTGAACCTGACTTTGACGGCTCTGGCTCCCAGATTCCCTGTCTTCCAAACCAGTGACTACCAGCTGTGGTTCCAGATAAATCTGGTTGTAGTGCTGGCCAGCTTCCGTCCTGAGGTTCTAGTGGTGATCCCCGCCAACCTCACCTGTGACGCTTACGATGCAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107662685

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11404 True 386 lncRNA 0.53 2 29470716 29474851

Neighbor

gene id symbol gene type direction distance location
mslnb LOC107566818,LOC107574164,LOC107707761 coding downstream 68338 29366477 ~ 29402378 (-)
LOC122359579 LOC107680745,LOC107740699,LOC107680747,LOC107662714,LOC107758392 coding downstream 130145 29335596 ~ 29340571 (-)
LOC122359260 LOC107680745,LOC107740699,LOC107680747,LOC107758392,LOC107662714,LOC107574731 coding downstream 144178 29320391 ~ 29326538 (-)
LOC122357818 LOC107678317,LOC107575749,LOC107719897 coding downstream 181223 29284247 ~ 29289493 (-)
LOC122360529 NA coding downstream 194012 29273251 ~ 29276704 (-)
zmp:0000001082 LOC107572597,LOC107755319,LOC107678952 coding upstream 27654 29502505 ~ 29518876 (-)
wfikkn1 wfikkn1,LOC107678954,LOC107758378 coding upstream 45043 29519894 ~ 29523243 (-)
ears2 ears2 coding upstream 115112 29589963 ~ 29594827 (-)
LOC122324192 zgc:92827,LOC107758210,LOC107665919,LOC107758399,LOC107573835,LOC107668524,LOC107573875 coding upstream 311734 29786585 ~ 29792237 (-)
LOC122358417 LOC107721946,LOC107662706,LOC107560594 coding upstream 325127 29799978 ~ 29806220 (-)
LOC122326539 NA non-coding downstream 476 29469675 ~ 29470240 (-)
LOC122326264 LOC107662685 non-coding downstream 3021 29466945 ~ 29467695 (-)
LOC122326350 NA non-coding downstream 4071 29465935 ~ 29466645 (-)
G7656 LOC107662685 non-coding downstream 6644 29463530 ~ 29464072 (-)
LOC122326391 NA non-coding downstream 7661 29462380 ~ 29463055 (-)
G7683 LOC107739936,LOC107690077,LOC107566820 non-coding upstream 22036 29496887 ~ 29500697 (-)
G7686 NA non-coding upstream 48048 29522899 ~ 29553586 (-)
G7675 cdc37 non-coding upstream 49344 29524195 ~ 29581127 (-)
G7694 NA non-coding upstream 73021 29547872 ~ 29549202 (-)
G7751 NA non-coding upstream 411429 29886280 ~ 29886672 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other downstream 36503 29411107 ~ 29434213 (-)
G7569 gtf3c1,LOC107678316 other downstream 160118 29301807 ~ 29310598 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 318171 29067982 ~ 29152545 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other downstream 338624 29049743 ~ 29132092 (-)
G7816 NA other upstream 717350 30192201 ~ 30197848 (-)
G7868 NA other upstream 1155383 30630234 ~ 30630505 (-)
G8009 NA other upstream 1468647 30943498 ~ 30957486 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 2057218 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 2075335 31550186 ~ 31554035 (-)

Expression


Co-expression Network