G8008


Basic Information

Item Value
gene id G8008
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30919545 ~ 30944969 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU11965
TGCCAAGATCGCCTAAAATGAGCAGAGGGGCTCGAAACAGACTTTTATAAACGTTATCATGAGTGTAAAAGGACAGAAGGGTCTTACTTTGGTGGTTGTGGCCATGGCACCTGCCATCTTCATTTGAGAGTTCATTAGCTTGGTTTGTGTTGACATGGAGGTGACCTTAGAGCTGACGGCATATGTACGCGTTTTCTGTTTCCTCACTTGAACAAGCTGCTTAGCTAAAACTTTGCAGGCGTCTCTGTTCCCAGTCTTTGCCATTTTCTTGATTTCCATCTCCTGAGATCAAGAAAGCAAATAGTAGAAAACAGGAAAGCAAAT

Function

GO:

id name namespace
GO:0022624 proteasome accessory complex cellular_component
GO:0008537 proteasome activator complex cellular_component
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11965 True 324 lncRNA 0.43 2 30919545 30944969

Neighbor

gene id symbol gene type direction distance location
cd99 LOC107746638,LOC107654756,LOC107714307,LOC107598750 coding downstream 46180 30862379 ~ 30873365 (-)
trnar-ucu_5 NA coding downstream 56584 30862870 ~ 30862961 (-)
gyg2 LOC107552233,LOC107746642,LOC107691603 coding downstream 58162 30854036 ~ 30861383 (-)
LOC122349663 LOC107720543,LOC107693906,LOC107718772,LOC107555189,LOC107701125 coding downstream 495263 30401205 ~ 30424282 (-)
LOC122349654 dchs2 coding downstream 518914 30393908 ~ 30400631 (-)
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding upstream 27820 30972789 ~ 30974161 (-)
LOC122349700 NA coding upstream 427527 31372496 ~ 31378539 (-)
LOC122349710 patl1,LOC107594300,LOC107657997,LOC107703847,LOC107598520 coding upstream 439371 31384340 ~ 31393086 (-)
tacr3l tacr3l,LOC107570821,LOC107657987,LOC107757062,LOC107703855,LOC107746088,LOC108411976 coding upstream 617012 31561981 ~ 31572621 (-)
cldnd1b cldnd1b,LOC107746097,LOC107757065,LOC107570824,LOC107703857,LOC107657989 coding upstream 646168 31591137 ~ 31595295 (-)
G7989 LOC107746637,LOC107691606 non-coding downstream 75375 30843717 ~ 30844170 (-)
G7988 NA non-coding downstream 76143 30842978 ~ 30843402 (-)
G7874 NA non-coding downstream 258078 30656456 ~ 30661467 (-)
G7866 NA non-coding downstream 359993 30559250 ~ 30559552 (-)
G7864 NA non-coding downstream 395932 30463323 ~ 30523613 (-)
G8007 NA non-coding upstream 3878 30948847 ~ 31004114 (-)
G8042 NA non-coding upstream 232825 31177794 ~ 31180161 (-)
G8054 NA non-coding upstream 259058 31204027 ~ 31297841 (-)
LOC122350699 NA non-coding upstream 295274 31240243 ~ 31242046 (-)
G8072 NA non-coding upstream 389641 31334610 ~ 31335142 (-)
G7868 NA other downstream 289040 30630234 ~ 30630505 (-)
G7816 NA other downstream 721697 30192201 ~ 30197848 (-)
G7648 LOC107662685,LOC107678949 other downstream 1443207 29426098 ~ 29476338 (-)
G7655 LOC107662685 other downstream 1444157 29452759 ~ 29475388 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other downstream 1485332 29411107 ~ 29434213 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 587100 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 605217 31550186 ~ 31554035 (-)
LOC122349741 NA other upstream 677705 31622674 ~ 31626684 (-)
LOC122349752 NA other upstream 681934 31626903 ~ 31630020 (-)

Expression


Co-expression Network