G8042


Basic Information

Item Value
gene id G8042
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31177794 ~ 31180161 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU12006
tatCTGTTATcgtttatttttacaaacattcaaCCTATATCACCTTTATCTCTCTGTActctttataaattataaaaaataatgtacaattaGTTTACTATGAACAATACATCATGACCTGATTGCCCAGAGTTTTCCCTTGCCCTGCTTGAAGTAAGCACTCGGTCCTCTTGCGCTTTTGACGTTTTGCACGTTGCAACTTGAAGTTTGTCAAGTGGTCTCAGCGTCCCGAACATGTGTTCAGGCACAAAGAGCCAATCGAAGGATGGGGGCCTGTATCAGCTAATGAACATGGTACGGTATTGTGCGTTCGTATGTCTGGTGGAAGCGGAAGAGACTGCAAACGCGTACGTTGCCATGGAAGGTATGAGCGTATGTAGGCCTGCTGTGTTGGGAAAAGTACTTGCCAACATGCAGAGTGCTGCTATATTGTGGCGTCCTCTAAATGAGAACATTTTACTGCAACCTGTCGCCTCGATGATTCCCCACTGACTATATGACGATGGTTTCATAGTCGCAAGGCAAACTGATAAAATATCAGAGGTGTCTGTAGAATCTGTACACCAAAGCAGACTGAACAAATGTGTGCTGTTCTCTGAATGGATTTGTCTAAGTTTGTTCAATTTGACCGTGGTGCACAGGAGTAAGAAAATGGCTTACAGTCTTCTGAAAGGTCAGACTTTTACCACCTCGCTGACAGCCTGAGGAAGTCAATGGTTTTgtgtggcatttttttttttttttttttcaacagagcAAGATAAAGCTCTCCGCTCCCTACCTTGGCTCTTTTCTTGGTTTTCTAAAGACTGCACATATTGCTTAGAAAAGGAACGAAACGAAAGGCAAccgaaaaaagaaacaaagtcacacGTACATATAAATATCAGGATAAATATCAGATGTGATAAACAATGTATAATAGCCATTTAAAGCTGAAGACATTCAACAGATCCATAGTCTCTCGTTTTAGAGGCTCGATGAATAAACCAGGAAAATCTCTTAAGAcacataatttaatacattaaaatagcaaatatgCTATTCAGAGTTCTCGGGTTTGGAGTCCGGTCAATCACAACGACTTGCAGGATGATTGACAGATGACATCTTCGTAACAACAAGAACGCTGCTTTGTTCCCGTGTTTACTGCGGTTCCTCCGGGTAAATGGTCCAATTTTCCTGTTACACACAGTTCATCAAGAAGACAACAATTCATGACATTTAGCATGATTCTTCATGCTCTTTATTTTGTACGTGTTTCAACTGGAAGTCTTCGCTGGATTAACAGAGGCTGCGGAGCTGTGCTCATGACTTGACAGCCCAGACCTGAAgcgcgcacgtgtgtgtgtgtgtgtgtgtgtgtgcgcgctgggagtatgtgtatgtgtatatgtgggTTTTTCATACATGGAAGCCACTCTGTTGAATGTGGAGGAACTGCAGTCGTAGTGCCTGTATGCTGCTCACTATCCTCCTCTGGTGGCCAATCAGAGACACTCCGATTCTTCTCACGTCACTGACTCATGGTGGATATGGAATCCAGGGTTGTGTATCCCGCTGCTATGAAGTTGGTCTTGTACTGACTCATTTTGATGGAATCCAACCAATCGCCGATAGATATGAAGAGAGGGTAGTCTGGCATATCCTCAGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12006 True 1657 lncRNA 0.55 2 31177794 31180161

Neighbor

gene id symbol gene type direction distance location
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding downstream 203633 30972789 ~ 30974161 (-)
creb1a creb1a,creb1b,LOC107714305,LOC107757658,LOC107691602,LOC107552236 coding downstream 236068 30936398 ~ 30941726 (-)
cd99 LOC107746638,LOC107654756,LOC107714307,LOC107598750 coding downstream 304429 30862379 ~ 30873365 (-)
trnar-ucu_5 NA coding downstream 314833 30862870 ~ 30862961 (-)
gyg2 LOC107552233,LOC107746642,LOC107691603 coding downstream 316411 30854036 ~ 30861383 (-)
LOC122349700 NA coding upstream 192335 31372496 ~ 31378539 (-)
LOC122349710 patl1,LOC107594300,LOC107657997,LOC107703847,LOC107598520 coding upstream 204179 31384340 ~ 31393086 (-)
tacr3l tacr3l,LOC107570821,LOC107657987,LOC107757062,LOC107703855,LOC107746088,LOC108411976 coding upstream 381820 31561981 ~ 31572621 (-)
cldnd1b cldnd1b,LOC107746097,LOC107757065,LOC107570824,LOC107703857,LOC107657989 coding upstream 410976 31591137 ~ 31595295 (-)
glb1 glb1,LOC107746116 coding upstream 415670 31595831 ~ 31602441 (-)
G8007 NA non-coding downstream 173680 30948847 ~ 31004114 (-)
G8008 NA non-coding downstream 232825 30919545 ~ 30944969 (-)
G7989 LOC107746637,LOC107691606 non-coding downstream 333624 30843717 ~ 30844170 (-)
G7988 NA non-coding downstream 334392 30842978 ~ 30843402 (-)
G7874 NA non-coding downstream 516327 30656456 ~ 30661467 (-)
G8054 NA non-coding upstream 23866 31204027 ~ 31297841 (-)
LOC122350699 NA non-coding upstream 60082 31240243 ~ 31242046 (-)
G8072 NA non-coding upstream 154449 31334610 ~ 31335142 (-)
G8063 NA non-coding upstream 174502 31354663 ~ 31478860 (-)
G8062 NA non-coding upstream 179958 31360119 ~ 31368228 (-)
G8009 NA other downstream 220308 30943498 ~ 30957486 (-)
G7868 NA other downstream 547289 30630234 ~ 30630505 (-)
G7816 NA other downstream 979946 30192201 ~ 30197848 (-)
G7648 LOC107662685,LOC107678949 other downstream 1701456 29426098 ~ 29476338 (-)
G7655 LOC107662685 other downstream 1702406 29452759 ~ 29475388 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 351908 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 370025 31550186 ~ 31554035 (-)
LOC122349741 NA other upstream 442513 31622674 ~ 31626684 (-)
LOC122349752 NA other upstream 446742 31626903 ~ 31630020 (-)

Expression


Co-expression Network