G8054


Basic Information

Item Value
gene id G8054
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31204027 ~ 31297841 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU12021
gtttttaaaaatatttctacaagaatgcattatttaatcgctgtttttgtttttttgttgtttttttttgtcttcaccATTAAATACATCTCAAtgctttccaaaacaaaaagaacaaaaaaaaaaaaagtattgaaatgTGTCTTGCTTCTCTCAATATAAGTACAGCACTCAGCAGACATTTCGCTTTTCCACGTCAGNaaaaaaaaacaaaaaacattttttgctcgATTCTTGCTATAAAAAGAGTAACTTCAAAACTCAGGAAAACTATCACAGAGAGGAttggaggaaagagaaagagagagtccGAGATGGAGAGCGACCATTGGCACAGAGTTATTGAACCAAAATCATGCAAGTTATGTTCCAAAACTGcttcgattaaaaaaaaaaaccccaaaaacaataacaatagcaCCAAATACAGTCATACgtacaaacatacacacgcTCAAATCCAGTTATGAGAGAATATACCATCAGACATTTTGAATGTGACGAAAGCAGCTACGTTTGGTTCCCGAACGTCTCTGTAAGTCAGGAACTTTAAGGAACAGGGTTCATATACATCAAGATCTGTCATATAAGGAAAAGGATGAATCGCTTCAGCGCGTTATTTTACACGGAGCTCTTGTATTTTCAAATTAGGAATgaaacaaaaccacaaacagAGGAGTACTGTGCAGAATATATGCAGTACCGTTTCCCATAGTGCGGTATATAAGCACTGAAACTAGTCTAGATACAGAGTTTGGTTAACAGAGCGTCCTGTACTGGATTCTTAGCCCATCAAACATGCCACTGGTTTGCATATTTTACGTCTTTCTTGTTTGGCAAGGGAGAAAAATAACCAGAGCGGACCGGAACAAGGGCCATTCAAAACCTGAAGGCAAACAATCACGCGTTGGTCATCTCTTTCGTCCGGGCTGTAAAGATTTGCTAGCGTTAATCAGAGCGGCAGGCTCTAAAGACGGGCCCAAGCCCACGAGCAAGAAAACGAGGtggagaataaaacatttggaaTTTCAGGAAGTAAAGAGTATCCTGCCTACCGCATAGCATTATCGTGAATTACTATTGCGGTTCAAGATCTCCGTTGGAAACGCCCCCCCGGAAATCCTGTAATTCCGAAACGCGATTGCGAGAAATTAACAAAACGCTTCACAATTGGTACtaacagtttgtttttgtggCGGCGACGGAAAGGCTTTGCTTTAATATTGAAAAGATTTACTAAGGATTTGCCCCGACGTTGATGAGATGTTCAACACCCCTATTCATTTCTCTTAAACCAATTACAATACNGcattccaaaaatgttttttttttttttttgaatgcgaatattcaaattaatatagcatctttaaataaaagaacGGTTGTTTTTTGGCCTCTAGGGATATcatgaaataaacacaatgaaCTGTTGTCTCTCAACCtaatattattgatttatgtATAACCGGAGCGCCTTGTCACAAGTCTTTTCATGCATTGGTGCTCCCCTGAGGAACACAACTGAAACGTTCATGTACAGAATGTGTGCATAATAATCCTTATACTCTCCCTTtgctttataaacacacacacgcacacacacacacacacacacacacacacacactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12021 True 1632 lncRNA 0.32 2 31204027 31297841

Neighbor

gene id symbol gene type direction distance location
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding downstream 229866 30972789 ~ 30974161 (-)
creb1a creb1a,creb1b,LOC107714305,LOC107757658,LOC107691602,LOC107552236 coding downstream 262301 30936398 ~ 30941726 (-)
cd99 LOC107746638,LOC107654756,LOC107714307,LOC107598750 coding downstream 330662 30862379 ~ 30873365 (-)
trnar-ucu_5 NA coding downstream 341066 30862870 ~ 30862961 (-)
gyg2 LOC107552233,LOC107746642,LOC107691603 coding downstream 342644 30854036 ~ 30861383 (-)
LOC122349700 NA coding upstream 74655 31372496 ~ 31378539 (-)
LOC122349710 patl1,LOC107594300,LOC107657997,LOC107703847,LOC107598520 coding upstream 86499 31384340 ~ 31393086 (-)
tacr3l tacr3l,LOC107570821,LOC107657987,LOC107757062,LOC107703855,LOC107746088,LOC108411976 coding upstream 264140 31561981 ~ 31572621 (-)
cldnd1b cldnd1b,LOC107746097,LOC107757065,LOC107570824,LOC107703857,LOC107657989 coding upstream 293296 31591137 ~ 31595295 (-)
glb1 glb1,LOC107746116 coding upstream 297990 31595831 ~ 31602441 (-)
G8042 NA non-coding downstream 23866 31177794 ~ 31180161 (-)
G8007 NA non-coding downstream 199913 30948847 ~ 31004114 (-)
G8008 NA non-coding downstream 259058 30919545 ~ 30944969 (-)
G7989 LOC107746637,LOC107691606 non-coding downstream 359857 30843717 ~ 30844170 (-)
G7988 NA non-coding downstream 360625 30842978 ~ 30843402 (-)
G8072 NA non-coding upstream 36769 31334610 ~ 31335142 (-)
G8063 NA non-coding upstream 56822 31354663 ~ 31478860 (-)
G8062 NA non-coding upstream 62278 31360119 ~ 31368228 (-)
G8066 NA non-coding upstream 167780 31465621 ~ 31467033 (-)
G8086 NA non-coding upstream 170454 31468295 ~ 31470517 (-)
G8009 NA other downstream 246541 30943498 ~ 30957486 (-)
G7868 NA other downstream 573522 30630234 ~ 30630505 (-)
G7816 NA other downstream 1006179 30192201 ~ 30197848 (-)
G7648 LOC107662685,LOC107678949 other downstream 1727689 29426098 ~ 29476338 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 234228 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 252345 31550186 ~ 31554035 (-)
LOC122349741 NA other upstream 324833 31622674 ~ 31626684 (-)
LOC122349752 NA other upstream 329062 31626903 ~ 31630020 (-)

Expression


Co-expression Network