G8093


Basic Information

Item Value
gene id G8093
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31548195 ~ 31548754 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU12081
GCTTGCATCACGAAACTTTGCCTAAACTTTGCTtccattaataacatttaacatcaGCGTGAActttccattccacaaaagACCCATTATAGTGtaggaaaggttttttttagattatataagatgttcttcacactaataataaattcaaaattgattaaaaaacgGTTCTCGTTTTgcattgctgcaaaaaaaagtgaaccTCTAAGGGTATATAGCAAATGATGTTTCTTTGATATCCTAATTGCTTCTTCTACAAGAATAATGCATTCAATGGAGATTTGATCTGACTCTGATCTGCAAGATTTGCCAGATTTGTCTTCCGAGGACAAATATTAGTAATCCTGTGCGTGTGCCTCGGCGAGTTTCACAAGAGTTTCAAAACTGCTTCTCAGACGTGACTCaaatgggtttttattttatagcaatatactctttttaatgatgtttagctataaacaaatttcgggaggagcacgcactgataattaacgcggctggcttctcgtttcctaatcacgcaattatccaaccagagcaagagaagcctactataaatt

Function

GO:

id name namespace
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12081 True 560 lncRNA 0.44 1 31548195 31548754

Neighbor

gene id symbol gene type direction distance location
LOC122349710 patl1,LOC107594300,LOC107657997,LOC107703847,LOC107598520 coding downstream 155109 31384340 ~ 31393086 (-)
LOC122349700 NA coding downstream 169656 31372496 ~ 31378539 (-)
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding downstream 574034 30972789 ~ 30974161 (-)
creb1a creb1a,creb1b,LOC107714305,LOC107757658,LOC107691602,LOC107552236 coding downstream 606469 30936398 ~ 30941726 (-)
trnar-ucu_5 NA coding downstream 685234 30862870 ~ 30862961 (-)
tacr3l tacr3l,LOC107570821,LOC107657987,LOC107757062,LOC107703855,LOC107746088,LOC108411976 coding upstream 13227 31561981 ~ 31572621 (-)
cldnd1b cldnd1b,LOC107746097,LOC107757065,LOC107570824,LOC107703857,LOC107657989 coding upstream 42383 31591137 ~ 31595295 (-)
glb1 glb1,LOC107746116 coding upstream 47077 31595831 ~ 31602441 (-)
LOC122327810 LOC107747443 coding upstream 85647 31634401 ~ 31661603 (-)
best2 best2,LOC107676102,LOC107569522,LOC107583204,LOC107694823,LOC100695332 coding upstream 179334 31728088 ~ 31734933 (-)
G8074 NA non-coding downstream 52285 31492297 ~ 31495910 (-)
G8084 NA non-coding downstream 67851 31479187 ~ 31480344 (-)
G8063 NA non-coding downstream 69335 31354663 ~ 31478860 (-)
G8100 acy3.2,LOC107657988,LOC107570825,LOC107703856,LOC107571911 non-coding upstream 31176 31579930 ~ 31580156 (-)
G8101 acy3.1,LOC107571911,LOC107746091,LOC107746117,LOC107703856,LOC107757064,LOC107570819,LOC107570825 non-coding upstream 31984 31580738 ~ 31589790 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other downstream 10779 31532069 ~ 31537416 (-)
G8009 NA other downstream 590709 30943498 ~ 30957486 (-)
G7868 NA other downstream 917690 30630234 ~ 30630505 (-)
G7816 NA other downstream 1350347 30192201 ~ 30197848 (-)
G7648 LOC107662685,LOC107678949 other downstream 2071857 29426098 ~ 29476338 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 1432 31550186 ~ 31554035 (-)
LOC122349741 NA other upstream 73920 31622674 ~ 31626684 (-)
LOC122349752 NA other upstream 78149 31626903 ~ 31630020 (-)

Expression


Co-expression Network