CI01000000_05465020_05466303


Basic Information

Item Value
gene id CI01000000_05465020_05466303
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 5464058 ~ 5466516 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_05465020_05466303.mRNA
ACAAACATGACTTCGGATCTGCCAGTTCTCCTCGCAGCAGTGTCAATACTGTCTGCTCTCCACATGGTGCTTGCTGCTCTTGGAGGAATTCTGTATATTGTGGGCAGAGAGATGTACTTTACTGGCTATATCAGTGAATCCAAGAAAAGGTTGCCAGGGTTTTACATGGTGTTGTGTGTCCTGTTATTCCTATCTGTGACGGCTACCTTTGGAATCATTCAATCATTTTTGGACAAATATCTCAACATCAGACTTCTCTAAAGAATTGAATTCTGGAGTTTAGAAGTTTGTAAACAGAAAACAGTTTTCATCAATTTATCAAACAAAATGCATGTAAAATGTATGTTATGTTTCAGGTATACTTGATTTTTTGTGTCAGTTGTCCTTCTAAGATTTACATTACAGTATTAATTTAGAGGATCTAATTATACACTCACCACTAAATTCTTACTATTCACTTGTTGGAAAATGTGATCTTTGGTGGACATCATGCGGACTGAATTGTAATGCTGGAATGAAGTGAATTTCATCAGGGAGAGTTAAAAGACCTGGACATACTTCACTGGAAGATAAATAGTAAATGCAGTTCTCAAACACTGTAACAGTATTTCCACTCCAGCAAGTCAAGGTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_05465020_05466303.mRNA False 637 mRNA 0.37 3 5464644 5466309

Neighbor

gene id symbol gene type direction distance location
CI01000000_05431517_05435978 CABP2B, CABP2 coding downstream 28666 5431517 ~ 5435978 (-)
CI01000000_05422567_05424822 CRYBA1L1 coding downstream 39214 5422246 ~ 5425430 (-)
CI01000000_05409025_05413963 TMEM33.L, TMEM33 coding downstream 50233 5408239 ~ 5414411 (-)
CI01000000_05380329_05386853 ANXA5A coding downstream 77791 5380055 ~ 5386853 (-)
CI01000000_05311908_05314253 NA coding downstream 150388 5310741 ~ 5314256 (-)
CI01000000_05477927_05479435 RAB33BA, RAB33B coding upstream 10953 5477262 ~ 5479435 (-)
CI01000000_05488574_05498163 NAA15, NAA15A coding upstream 22027 5488336 ~ 5498163 (-)
CI01000000_05527503_05531978 NOCTA, NOCT coding upstream 60509 5526818 ~ 5532298 (-)
CI01000000_05537990_05549497 SLU7 coding upstream 71069 5537378 ~ 5549606 (-)
CI01000000_05550969_05558473 FERMT3B coding upstream 84528 5550837 ~ 5558473 (-)
G3528 NA non-coding downstream 57871 5402922 ~ 5406773 (-)
G3628 NA non-coding downstream 62676 5401679 ~ 5401968 (-)
G3629 NA non-coding downstream 64394 5394847 ~ 5400250 (-)
G3627 NA non-coding downstream 70141 5393683 ~ 5394503 (-)
G3616 NA non-coding downstream 88130 5376213 ~ 5376514 (-)
G3644 NA non-coding upstream 14376 5480685 ~ 5481627 (-)
G3546 NA non-coding upstream 49096 5515405 ~ 5516902 (-)
CI01000000_05685300_05686328 NA non-coding upstream 122860 5683707 ~ 5687424 (-)
G3511 NA non-coding upstream 215236 5681545 ~ 5683630 (-)
G3674 NA non-coding upstream 222592 5688901 ~ 5689134 (-)
G2730 NA other downstream 1074492 4386383 ~ 4390152 (-)
CI01000000_04079738_04081018 MIF other downstream 1383527 4078121 ~ 4081117 (-)
G2484 NA other downstream 1891090 3570066 ~ 3573554 (-)
CI01000000_03564077_03564373 NA other downstream 1897553 3562887 ~ 3567571 (-)
CI01000000_03245643_03246684 NA other downstream 2217929 3245134 ~ 3246721 (-)
G3650 NA other upstream 74154 5540463 ~ 5540881 (-)
G3716 NA other upstream 534098 6000407 ~ 6000769 (-)
G3931 NA other upstream 690704 6157013 ~ 6403525 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other upstream 4938019 10407395 ~ 10409950 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other upstream 5358102 10824324 ~ 10825464 (-)

Expression


Co-expression Network