G1301


Basic Information

Item Value
gene id G1301
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6279217 ~ 6280631 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1900
TGCATATAGGTCAAAGCCGTTTACTATGCATGTACCAGGGAAgaacacatactgtaaaataaagggTCTTTCTATAGGCTTTGGTACTTACCTTTTCAGGGTCGACCTTGTCGTAGAGCTTCAGGACGTAGAGGACACGGTCCTGGACACTCTCTAGGGTTAATGGGGGCAAGCCACCATACTTCCTCCACTGATAAACCTGAAGTGAACTGCCGGAGAGCTGCCGGCAGAGACTTGTGTCCAGTAGTCAGCCCTGAAAATGTTCGTCCTTGGGTGAGTGGAGCTGCTGTTAATGTCGAGGCAGCAGTGACACGGTTAAAACATACAGAACGGTGGTTTAGTGCTCGGACACACCGGACAACGATGCGCGCCGCCATGTTTCTCAATCCGCTCCCACAATGCACGACGCTACCACTGCGCATGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1900 True 426 lncRNA 0.36 2 6279217 6280631

Neighbor

gene id symbol gene type direction distance location
cacng3a cacng3,LOC107590766 coding upstream 11716 6262422 ~ 6267501 (+)
prkcba prkcb,LOC107722959,LOC107702530 coding upstream 18469 6233036 ~ 6260748 (+)
tlr2 tlr2,LOC107590711,LOC107722930 coding upstream 48035 6226398 ~ 6231182 (+)
zgc:77849 zgc:77849,LOC107722949,LOC103038624,LOC107692663,LOC107564565,LOC108439082,LOC107702534,LOC107590708 coding upstream 165692 6107861 ~ 6113525 (+)
fscn1b fscn1,fscn1b,LOC107692665,LOC107564588,LOC107722932,LOC107590764,LOC107702511 coding upstream 179387 6094349 ~ 6099830 (+)
rasd3 zgc:152698,LOC107565554,LOC107692726 coding downstream 8099 6288730 ~ 6292181 (+)
plk1 plk1,LOC107722962,LOC107590713,LOC107702528 coding downstream 14118 6294749 ~ 6299522 (+)
chtf18 chtf18,LOC107692658,LOC107702521,LOC107722946,LOC107725360 coding downstream 33339 6313970 ~ 6327004 (+)
uncx4.1 uncx4.1,LOC107725405,LOC107564450,LOC107692652,LOC107722947,LOC107702525,LOC107590715 coding downstream 77197 6357828 ~ 6362500 (+)
elfn1b elfn1b,LOC107564393,LOC107714143,LOC107692646,LOC107722936,LOC107590768,LOC107702506 coding downstream 199505 6480136 ~ 6619283 (+)
G1292 NA non-coding upstream 1929 6227292 ~ 6277288 (+)
G1287 socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765 non-coding upstream 57821 6219924 ~ 6221396 (+)
G1206 NA non-coding upstream 163936 6114964 ~ 6115281 (+)
G1201 NA non-coding upstream 188060 6090845 ~ 6091157 (+)
G1200 NA non-coding upstream 188764 6090173 ~ 6090453 (+)
G1332 LOC107692651,LOC107725361,LOC107590714,LOC107722945,LOC107702522 non-coding downstream 51445 6332076 ~ 6345567 (+)
G1348 NA non-coding downstream 119761 6400392 ~ 6400757 (+)
G1357 NA non-coding downstream 156323 6436954 ~ 6437177 (+)
G1358 NA non-coding downstream 157177 6437808 ~ 6443476 (+)
G1360 NA non-coding downstream 161926 6442557 ~ 6442860 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other upstream 191562 6057404 ~ 6087655 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other upstream 398083 5879460 ~ 5881134 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 1253303 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 1301954 4967186 ~ 4977263 (+)
prkag3a prkag3a,LOC107750059,LOC107673997,LOC107676055 other upstream 1334376 4938181 ~ 4944841 (+)
G1318 NA other downstream 5227 6285858 ~ 6287198 (+)
G1414 NA other downstream 252871 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 431004 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other downstream 490855 6771486 ~ 6782141 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other downstream 565869 6846500 ~ 6860270 (+)

Expression


Co-expression Network