G1332 (LOC107692651,LOC107725361,LOC107590714,LOC107722945,LOC107702522)


Basic Information

Item Value
gene id G1332
gene name LOC107692651,LOC107725361,LOC107590714,LOC107722945,LOC107702522
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6332076 ~ 6345567 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1948
GAGAAGCAACCAATGTGTGtcctttttccatttttctttgaaatgacTTACTGCTGCCATAGAAACTGGCGTGTCACCCACTGAGGTCGTGGTGAGCAGCCTGGCCACTCCCTGCACCACTGACGGACAGTCTCCCTCAGCACCATCCGGCGGAGCCACCAGCGTCAGTTTTGGAGTCGCCCTCTCTCCAGTCTGGAGCCGCTTTGAATCCGAATCCACAGCAGACCTGCTCCACATCATCTGGACTGATCCAGCTCCCTCTGCCGTCACCGGACTTCTCTGAGTGCTGGTATGATGGTTCTCAATCTTGTTACCTTCCTTGTGGTTCTGATTAGGAAGATGGGTGGAGAAGGCGGcagatgtttgtgtgtttgagggGGTTTTGGCAGTGGTGCTCAGCGTGGCTTCGGGTTGCATGCTCACAGGTACGCTCAAGCGTTTGCGTTTAAGTGCTGGTGGGCCCTGAATTTCTGGATTATTCTTACTATCCTCAGGGGTGGAGCTGACCTGTGCATTcttttttagttttgttgtacCTATTGGCTTTTTCCTTGccctgtaaaataaaaaaaaaggttttggttgggttttaattatttaactagGAAGGTGTACATTCGTCTTTTCTGAtaacagagtaaaaaaaacattataaacaatatTCTTCAGAAGGGATGAATAATACAGTATCTAGGAAGTGTGTAGTAGAATCAAGCTTACACAACACCAGTAATGTGGCCATGGGCTTTTCGTGTTTCTATAAGCAAAATCCTATTAAGAACAGGACAGACATAAagttattaataacaattatcCCCAAGCAAGGTTTCATGTATATTAAGGGCTGAACAGTAATGGTTgagtctttctttttcatctgaTAAGCAAAAGATCTGATTTTGTAATGCATTCACTTAATCAaacgtgacagtaaagacactaataacaataataagaagaggaagaggaagaggaagaagaagaattcttgagcagaaaatcagcatattagaatgatttctgaaggatcatgtgactgtgaaaactggagtaatgatgctggaaaccTCAGCTTTCAGTGTTTAAGAGCAACAGACAAGTTTACTGTGAATTACTTGTCAATTGTAAACGATGAACAACTTAACTTGgccttaattttaattatgttcaAAATATCAAAGTATTAATAATTTGCTTTGCATACCTGGATTGCATCCATCCTTTAGGCCAAAGTGGTTTAACATCGGCCTCTAGGAATGCTTTCAGATACTCTTCCAAACTAGAGCACGCAAGCGACTCGGAATCATAAATAATCATCTTCAAATTGACGATCTCAAAGAGCAGCTCCCTGTAAAAGTCCATACAGTGATATTGGGTTATACTGATGAcatatataattgaataatacATTGTACACCCAAGAGAGACTGGACCTGATCTCTTCGTTCCATCTGAACCTCTTGCGAGGCCCGAACACTCGTTTTCCACTcctttcctcttcttcttcatcagagCCATCAATCACCCTCTCTTTCTCAGCCTCAAGT
>TU1949
AGATAAGTTTAATTCTTACTGAATCAACTGTCTATGGTAGCCCTTAAGATACCAGCACAAACATACAGTCTGAATATGGTCTAATTATTGTTATcgataacataaaaaaaatatattgagaaATATGTCAATATTGCACACCCCTAAAATCTCACCTCAGGTCATTTTTTCCAACTTTGCATAGATACAAAGTGAGGCTTGACAAGGCAGTattcaatttaaacatttggatgtataaaaatggcaaaaaggcTACAAAACTAAAGAAAATCTGACCCGCAACAACACAATGTCAACAATAGAATATTTTAGGAAACTTTATTTCCACATTACaccttcaaatattttttcaaagtcATTTTTCAGTAAGTTCAAAAACAAAAGCGAGTGCATGTTCTCTACATATATTGCAGCATTACTCAATAACTCGGCCACCGTACTTAAACAGCCCTGAGATCATTACACTGGCATCATTTTCATTACCCagtccaacaacaacaacaacatcaagaaaacaagaaaaagtgcAGTCTCTGGCTTTGACTAGTACAACAGATTCTGAGCTCCTTTATATTTTCAATGCAAACatgtatttgaaaataacaCTGTAGCGTGGAAACCCACACCACCTGGAATTAACcgttcatttaatttcataaataagtTAGGATTGTGGATCTTAACTGGTAGATCccctctgagagagatggaaattAAGGAGGTGTAGAATACAGAAATATCTGCCTTAGAAGTTGAAAGTAAGTGCGTTACAAGTGCATATCACTGCACTGAGGTCACACGGCTGGTCAAATCATTCTAAATATAATCAAtactgtgaaaaacaaaaagatttataGATATAGTCCTTATGTCCATTTTcaataagtgcatttttttttttatccaaataaactttttttgaaaaagattgattctaaaacatacaaattaaatGTCTCCTAATCTTctcttttaaatttgaattcagATCCACGTTCTGTCAGCTCCATCTTCATAATCATACGAAAAGTAGCAGATTTTGCTTTAGGTAACAgccatctttcatttcattctaatGGCCATTAATGTAGCTTTCTCCGAGCATTTAGACCATCTGTGTGCATCTGGCTTCCATCTGTGGGCTTTCCCAAAGGCGTGTAGATTTACCTAAACCAAAGAGCCATGGTGTTAAAGAATGAagaggagcaggagaagaaacaGGGACAGAGAGAAGATGAAGCGTGCTAGAGCACAGCATGGAGTTACCTGAAACaggaaagagaggaggaggaagaagaagaaaacaccAGGATGacaaatgtaacattacagCGATGGTgcaaagtgcttttaaacgtcaCACAAGAGTTGTGCTTCAGCTCGTCCATATCCATTGCACACAAAGACAAGAGTACAAGATCATGACagattatgaatttattaagCCCCTGTATGTAGCTAAAGGTGAAgcgtgtcatttaaaaaaaatgctagaaTAGTTCTGGAATCAATTCTATTTTGTGCTGTAACTGGAGCATAAATAACACACTCCACCTTTAAACAAACGGAGATGATGCTTACCAAGTTCCATGGTTATTTTCAGGATCAATATCTGCTCACCGTGTGCGAGACCATGCTGGAAATTTCCAGTTGCTGGGCCAGGAAAAACAGCTCCTTTGCAGGCCTGAGGCTGTCCAGGGAGTTTGGTGCCAGGGCTGAGCCCAGGGAACGGGAGAGCATGCAGGGGGGCAAAGCTCGGTAAAACCCCCGGCTGTACCGTGCTGGGATAAGAGGATGGAAGGAGTGATAGAGAAGGAGTGGGAAGAGCTGGGTTTCCACAGGAGATCTCACCGGCTGCCTGAAACACAAGTCAAGAAAATTGTGTTATTCATAAGTGTTATTCAGTGCAAAAAACCTCAGTACTTCAGACAAATCCTTTCCTATTTAAGCTCCAAAGGAATTGACCAAAAACCTTGTATTACATAATATGTACTGAACTGATCATAACTGatagtaaacatttaaaatttgttacataacatttaatcaattttgttgttttgaaatttcttttcagtaaacatgttttaaaaaaaggacaaaaatattaactgttATTAACATTGACAAGTAATTCTCCATGAGcaaccaaatcagcatattta
>TU1950
tttttttttttttttttttttttTATTTTAGGAAACTTTATTTCCACATTACaccttcaaatattttttcaaagtcATTTTTCAGTAAGTTCAAAAACAAAAGCGAGTGCATGTTCTCTACATATATTGCAGCATTACTCAATAACTCGGCCACCGTACTTAAACAGCCCTGAGATCATTACACTGGCATCATTTTCATTACCCagtccaacaacaacaacaacatcaagaaaacaagaaaaagtgcAGTCTCTGGCTTTGACTAGTACAACAGATTCTGAGCTCCTTTATATTTTCAATGCAAACatgtatttgaaaataacaCTGTAGCGTGGAAACCCACACCACCTGGAATTAACcgttcatttaatttcataaataagtTAGGATTGTGGATCTTAACTGGTAGATCccctctgagagagatggaaattAAGGAGGTGTAGAATACAGAAATATCTGCCTTAGAAGTTGAAAGTAAGTGCGTTACAAGTGCATATCACTGCACTGAGGTCACACGGCTGGTCAAATCATTCTAAATATAATCAAtactgtgaaaaacaaaaagatttataGATATAGTCCTTATGTCCATTTTcaataagtgcatttttttttttatccaaataaactttttttgaaaaagattgattctaaaacatacaaattaaatGTCTCCTAATCTTctcttttaaatttgaattcagATCCACGTTCTGTCAGCTCCATCTTCATAATCATACGAAAAGTAGCAGATTTTGCTTTAGGTAACAgccatctttcatttcattctaatGGCCATTAATGTAGCTTTCTCCGAGCATTTAGACCATCTGTGTGCATCTGGCTTCCATCTGTGGGCTTTCCCAAAGGCGTGTAGATTTACCTAAACCAAAGAGCCATGGTGTTAAAGAATGAagaggagcaggagaagaaacaGGGACAGAGAGAAGATGAAGCGTGCTAGAGCACAGCATGGAGTTACCTGAAACaggaaagagaggaggaggaagaagaagaaaacaccAGGATGacaaatgtaacattacagCGATGGTgcaaagtgcttttaaacgtcaCACAAGAGTTGTGCTTCAGCTCGTCCATATCCATTGCACACAAAGACAAGAGTACAAGATCATGACagattatgaatttattaagCCCCTGTATGTAGCTAAAGGTGAAgcgtgtcatttaaaaaaaatgctagaaTAGTTCTGGAATCAATTCTATTTTGTGCTGTAACTGGAGCATAAATAACACACTCCACCTTTAAACAAACGGAGATGATGCTTACCAAGTTCCATGGTTATTTTCAGGATCAATATCTGCTCACCGTGTGCGAGACCATGCTGGAAATTTCCAGTTGCTGGGCCAGGAAAAACAGCTCCTTTGCAGGCCTGAGGCTGTCCAGGGAGTTTGGTGCCAGGGCTGAGCCCAGGGAACGGGAGAGCATGCAGGGGGGCAAAGCTCGGTAAAACCCCCGGCTGTACCGTGCTGGGATAAGAGGATGGCAGCACCATCCGGCGGAGCCACCAGCGTCAGTTTTGGAGTCGCCCTCTCTCCAGTCTGGAGCCGCTTTGAATCCGAATCCACAGCAGACCTGCTCCACATCATCTGGACTGATCCAGCTCCCTCTGCCGTCACCGGACTTCTCTGAGTGCTGGTATGATGGTTCTCAATCTTGTTACCTTCCTTGTGGTTCTGATTAGGAAGATGGGTGGAGAAGGCGGcagatgtttgtgtgtttgagggGGTTTTGGCAGTGGTGCTCAGCGTGGCTTCGGGTTGCATGCTCACAGGTACGCTCAAGCGTTTGCGTTTAAGTGCTGGTGGGCCCTGAATTTCTGGATTATTCTTACTATCCTCAGGGGTGGAGCTGACCTGTGCATTcttttttagttttgttgtacCTATTGGCTTTTTCCTTGccctgtaaaataaaaaaaaaggttttggttgggttttaattatttaactagGAAGGTGTACATTCGTCTTTTCTGAtaacagagtaaaaaaaacattataaacaatatTCTTCAGAAGGGATGAATAATACAGTATCTAGGAAGTGTGTAGTAGAATCAAGCTTACACAACACCAGTAATGTGGCCATGGGCTTTTCGTGTTTCTATAAGCAAAATCCTATTAAGAACAGGACAGACATAAagttattaataacaattatcCCCAAGCAAGGTTTCATGTATATTAAGGGCTGAACAGTAATGGTTgagtctttctttttcatctgaTAAGCAAAAGATCTGATTTTGTAATGCATTCACTTAATCAaacgtgacagtaaagacactaataacaataataagaagaggaagaggaagaggaagaagaagaattcttgagcagaaaatcagcatattagaatgatttctgaaggatcatgtgactgtgaaaactggagtaatgatgctggaaaccTCAGCTTTCAGTGTTTAAGAGCAACAGACAAGTTTACTGTGAATTACTTGTCAATTGTAAACGATGAACAACTTAACTTGgccttaattttaattatgttcaAAATATCAAAGTATTAATAATTTGCTTTGCATACCTGGATTGCATCCATCCTTTAGGCCAAAGTGGTTTAACATCGGCCTCTAGGAATGCTTTCAGATACTCTTCCAAACTAGAGCACGCAAGCGACTCGGAATCATAAATAATCATCTTCAAATTGACGATCTCAAAGAGCAGCTCCCTGTAAAAGTCCATACAGTGATATTGGGTTATACTGATGAcatatataattgaataatacATTGTACACCCAAGAGAGACTGGACCTGATCTCTTCGTTCCATCTGAACCTCTTGCGAGGCCCGAACACTCGTTTTCCACTcctttcctcttcttcttcatcagagCCATCAATCACCCTCTCTTTCTCAGCCTCAAGT

Function

NR:

description
PREDICTED: ubinuclein-1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1948 False 1547 lncRNA 0.43 2 6343925 6345567
TU1949 False 2165 lncRNA 0.39 3 6339546 6343720
TU1950 True 2927 lncRNA 0.34 6 6332076 6345567

Neighbor

gene id symbol gene type direction distance location
chtf18 chtf18,LOC107692658,LOC107702521,LOC107722946,LOC107725360 coding upstream 5072 6313970 ~ 6327004 (+)
plk1 plk1,LOC107722962,LOC107590713,LOC107702528 coding upstream 32554 6294749 ~ 6299522 (+)
rasd3 zgc:152698,LOC107565554,LOC107692726 coding upstream 39895 6288730 ~ 6292181 (+)
cacng3a cacng3,LOC107590766 coding upstream 64575 6262422 ~ 6267501 (+)
prkcba prkcb,LOC107722959,LOC107702530 coding upstream 71328 6233036 ~ 6260748 (+)
uncx4.1 uncx4.1,LOC107725405,LOC107564450,LOC107692652,LOC107722947,LOC107702525,LOC107590715 coding downstream 12261 6357828 ~ 6362500 (+)
elfn1b elfn1b,LOC107564393,LOC107714143,LOC107692646,LOC107722936,LOC107590768,LOC107702506 coding downstream 134569 6480136 ~ 6619283 (+)
LOC122348963 elfn1b,LOC107692646,LOC107714143,LOC107564393,LOC107722936,LOC107590768,LOC107702506 coding downstream 329830 6675397 ~ 6693693 (+)
pmm2 pmm2,LOC107692644,LOC107590721,LOC107722953 coding downstream 416412 6761979 ~ 6765915 (+)
LOC122342636 LOC107692694,LOC107565156,LOC107590746,LOC107722971,LOC107714127,LOC107663320 coding downstream 449827 6795394 ~ 6796388 (+)
G1301 NA non-coding upstream 51445 6279217 ~ 6280631 (+)
G1292 NA non-coding upstream 54788 6227292 ~ 6277288 (+)
G1287 socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765 non-coding upstream 110680 6219924 ~ 6221396 (+)
G1206 NA non-coding upstream 216795 6114964 ~ 6115281 (+)
G1201 NA non-coding upstream 240919 6090845 ~ 6091157 (+)
G1348 NA non-coding downstream 54825 6400392 ~ 6400757 (+)
G1357 NA non-coding downstream 91387 6436954 ~ 6437177 (+)
G1358 NA non-coding downstream 92241 6437808 ~ 6443476 (+)
G1360 NA non-coding downstream 96990 6442557 ~ 6442860 (+)
G1367 NA non-coding downstream 110500 6456067 ~ 6457358 (+)
G1318 NA other upstream 44878 6285858 ~ 6287198 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other upstream 244421 6057404 ~ 6087655 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other upstream 450942 5879460 ~ 5881134 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 1306162 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 1354813 4967186 ~ 4977263 (+)
G1414 NA other downstream 187935 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 366068 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other downstream 425919 6771486 ~ 6782141 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other downstream 500933 6846500 ~ 6860270 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other downstream 801306 7146873 ~ 7152220 (+)

Expression


Co-expression Network