G1358


Basic Information

Item Value
gene id G1358
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6437808 ~ 6443476 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU1982
CCTATATTCATCACTCGATTTGAGCAGCAGCAAACAAACACTCTTAGCATAAATGCATATCAAAAGCAGCGACTCATGTAAAGCTCAATGGGGTGTCCTCGGCTGTAGACACTTTCAGTGGATCAGATGGAAGGAAACACAGCAGATTTTTCACTCAACGACAAAGCCAAACAGAGACAGAACCGGAATAAATTTGTATGCATTAGAAGCCCACAAACACATGCTGCAAGACACAAATGCTAACACAGGCTACGTTATTAAGCTGGATCTTGGTCAGTCTCTGAGGGACTAACAGGAGATACGACGCTGCCACTGCTGGAGTCTGGAAGAGACGAAAACATACAGATGAACAAAGAAATCGTGAAACTAAGAAACAAATGTACCGCATGTAGTGCTCTTATTAATCGTAACACGAATGAATGTTAATGCTATTGTTCAGGTTAACTTAATGCATGTTTGGCTGTACTTGGGATTCTTTGAGAAAGTAACTGTATTTCTATAGTTTATGGACAcggtacaaaaaaaattatgccatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1982 True 537 lncRNA 0.45 3 6437808 6443476

Neighbor

gene id symbol gene type direction distance location
uncx4.1 uncx4.1,LOC107725405,LOC107564450,LOC107692652,LOC107722947,LOC107702525,LOC107590715 coding upstream 75308 6357828 ~ 6362500 (+)
chtf18 chtf18,LOC107692658,LOC107702521,LOC107722946,LOC107725360 coding upstream 110804 6313970 ~ 6327004 (+)
plk1 plk1,LOC107722962,LOC107590713,LOC107702528 coding upstream 138286 6294749 ~ 6299522 (+)
rasd3 zgc:152698,LOC107565554,LOC107692726 coding upstream 145627 6288730 ~ 6292181 (+)
cacng3a cacng3,LOC107590766 coding upstream 170307 6262422 ~ 6267501 (+)
elfn1b elfn1b,LOC107564393,LOC107714143,LOC107692646,LOC107722936,LOC107590768,LOC107702506 coding downstream 36660 6480136 ~ 6619283 (+)
LOC122348963 elfn1b,LOC107692646,LOC107714143,LOC107564393,LOC107722936,LOC107590768,LOC107702506 coding downstream 231921 6675397 ~ 6693693 (+)
pmm2 pmm2,LOC107692644,LOC107590721,LOC107722953 coding downstream 318503 6761979 ~ 6765915 (+)
LOC122342636 LOC107692694,LOC107565156,LOC107590746,LOC107722971,LOC107714127,LOC107663320 coding downstream 351918 6795394 ~ 6796388 (+)
pdia2 LOC107692722,LOC107714133,LOC107663318,LOC107565477,LOC107722973,LOC107590747 coding downstream 354846 6798322 ~ 6802759 (+)
G1357 NA non-coding upstream 631 6436954 ~ 6437177 (+)
G1348 NA non-coding upstream 37051 6400392 ~ 6400757 (+)
G1332 LOC107692651,LOC107725361,LOC107590714,LOC107722945,LOC107702522 non-coding upstream 92241 6332076 ~ 6345567 (+)
G1301 NA non-coding upstream 157177 6279217 ~ 6280631 (+)
G1292 NA non-coding upstream 160520 6227292 ~ 6277288 (+)
G1367 NA non-coding downstream 12591 6456067 ~ 6457358 (+)
G1415 LOC107747400,LOC107719078 non-coding downstream 96153 6539629 ~ 6541531 (+)
G1405 ugt5b1,LOC107692647,LOC107714140,LOC107564400 non-coding downstream 140500 6583976 ~ 6591255 (+)
LOC122351800 lratb,LOC107714130,LOC107590749,LOC107665934,LOC107758869,LOC108258974 non-coding downstream 466900 6910376 ~ 6911075 (+)
LOC122351810 NA non-coding downstream 467605 6911081 ~ 6912265 (+)
G1318 NA other upstream 150610 6285858 ~ 6287198 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other upstream 350153 6057404 ~ 6087655 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other upstream 556674 5879460 ~ 5881134 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 1411894 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 1460545 4967186 ~ 4977263 (+)
G1414 NA other downstream 90026 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 268159 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other downstream 328010 6771486 ~ 6782141 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other downstream 403024 6846500 ~ 6860270 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other downstream 703397 7146873 ~ 7152220 (+)

Expression


Co-expression Network