G1544


Basic Information

Item Value
gene id G1544
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6958686 ~ 7002988 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2262
CCACTGCTGGTTTATTTCCACTCAAactttaattttcaagcgaaaaaGCCAGAATATGAAAAGATGTGTTTTACTTCACGTAAGTCAGAGCAGCATTTAGACACAAAAATCCACagataaattacaataaatatcaATGTAAACATTATCAATATACATGTTCATCTGTTGTTATGTACACACATCCCTCAAGCTGTccataaaacagcaaaacattaacgtttcaaacaaaaacaaaatcaagcaCTTCAACACAAATAGTCCAGTACCCTGAAAATGCAGCAACACTTTTGTCAGAaattaaagttataaaataCATCTTTATTTACAATCCTCATGTAAAATGGAGTACAATCCATGTACCCgaacacacacaataataacaaaatgaacGATGGTGCATCCTATTGCATTTACCTGAAATAAAGTCAACACAGCTGACCTTGCGAGTGTGTCTTCAAGTCCCTTAAAGCCAATCAATGGTAATgtgacaaaatatatactgttcgCGGGTTAACATACtgctttattaacaaaatactaATGAGAGAAAACTGATTAATCCTCATAATTAacgttacataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2262 True 620 lncRNA 0.54 2 6958686 7002988

Neighbor

gene id symbol gene type direction distance location
LOC122351719 fga,LOC107692636,LOC107714149,LOC107565125,LOC107714150,LOC107758872 coding downstream 113230 6839928 ~ 6845456 (-)
rnf175 rnf175,LOC107714147,LOC107692639,LOC107564352,LOC107665971 coding downstream 124604 6828520 ~ 6834082 (-)
pgap6 tmem8a,LOC107714144,LOC107692641,LOC107564383,LOC107722960,LOC107590745,LOC107663323 coding downstream 166817 6782533 ~ 6791869 (-)
c1h7orf26 LOC107714132,LOC107722952,LOC107663321,LOC107692723,LOC107565504 coding downstream 188109 6766062 ~ 6770577 (-)
LOC122346519 mad1l1,LOC107564387,LOC107722950,LOC107590744,LOC107714125 coding downstream 196915 6714745 ~ 6761771 (-)
LOC122351948 LOC107758836,LOC107692686,LOC107723162,LOC107665933,LOC107565093,LOC107590751,LOC557811 coding upstream 5610 7008598 ~ 7019036 (-)
cnpy3 tnrc5,LOC107758855,LOC107590778,LOC107723163,LOC107665936,LOC107565448,LOC107692718 coding upstream 62137 7065125 ~ 7069577 (-)
zgc:174945 NA coding upstream 131403 7134391 ~ 7135608 (-)
LOC122344706 LOC107565429,LOC107590752,LOC107692683 coding upstream 132772 7135760 ~ 7138480 (-)
LOC122344694 LOC107723159,LOC107565429,LOC107723172,LOC107665982,LOC107758876,LOC107590752,LOC107692684 coding upstream 138345 7141333 ~ 7143853 (-)
G1532 NA non-coding downstream 98420 6859889 ~ 6860266 (-)
G1531 NA non-coding downstream 100625 6857795 ~ 6858061 (-)
G1529 NA non-coding downstream 102578 6855795 ~ 6856108 (-)
G1528 NA non-coding downstream 104312 6854074 ~ 6854374 (-)
G1499 fgb,LOC107665922,LOC107692638,LOC107714148,LOC107564337 non-coding downstream 119277 6782413 ~ 6839409 (-)
G1632 NA non-coding upstream 147297 7150285 ~ 7152480 (-)
LOC122341717 NA non-coding upstream 294506 7297494 ~ 7298145 (-)
G1660 knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 non-coding upstream 309264 7312252 ~ 7312898 (-)
G1663 NA non-coding upstream 312922 7315910 ~ 7316318 (-)
G1781 NA non-coding upstream 653090 7656078 ~ 7660532 (-)
LOC122342514 NA other downstream 414128 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 490432 6456044 ~ 6468254 (-)
gng13a NA other downstream 630345 6327023 ~ 6328341 (-)
si:ch211-14k19.8 LOC107725402,LOC107692660,LOC107564509,LOC107722969,LOC107702529,LOC107590712 other downstream 683935 6267663 ~ 6274751 (-)
socs1b socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765,LOC107725364,LOC107565573,LOC107692731 other downstream 732572 6220604 ~ 6226114 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other upstream 68601 7071589 ~ 7134282 (-)
G1642 NA other upstream 122654 7125642 ~ 7170022 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other upstream 201016 7204004 ~ 7295829 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 1489156 8492144 ~ 8500212 (-)
G1926 NA other upstream 1553052 8556040 ~ 8607795 (-)

Expression


Co-expression Network