G175


Basic Information

Item Value
gene id G175
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1218065 ~ 1218734 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU245
GCGATCACCCGTCCGTTCTCCACCTGGCAGCTCTTGGGCGGGTGAGCGAATTTGCATTCCTCGTCGCTGCGCGAGCACGTCCCTCTCTGAAACTGCCGGCACACCTCGAGCGTCAGCCACTTCGTGTCTCGTATCGACGCGATGTTTAAAGCCATAGCTGTTTGAGAACCTGCAGGCTCTATGGTGTCGGTTTGCGGGATTGTTGCTtcgggtttaaaaaaaaaagtctgcgaACGTATTTCTGTGCTGTTTCGTGACTGGTCTTGAGGTTCGTCGGCGAGGCCCTTTAAATAGAGACGTCACATTCAGACCCCTGCTGGCTGTCGCGCTGGGAGATGGTGGCTATCAGTGAAGCTGTCAGTCTCGTTCATCAGTCATTTAGTCCCAGGTGCACAACAACGCCGCAACAATAAGAACATGCTCCAGGTCTCCAAATGGATGGCAATGTCTGAAGGCAACGGCTCTCCTTGGAACGGTATCTAATAGCGTCCGTGAACGGAAAAAGCGTGTAGTTTCCTTGTGCTTTGGCAAGTCTGAGGAATTGAGATATTTTCGGAGGCCAAGCCAGCGTTGTTTACAGTGTAGGATGGGAGAGGCGAGCAGCTTCAAGTAGGAACGTCGTCAGAGAAGGCACTTTCTTCAGTCCGgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU245 True 649 lncRNA 0.52 2 1218065 1218734

Neighbor

gene id symbol gene type direction distance location
LOC122341978 NA coding upstream 170254 1043183 ~ 1047811 (+)
ggact.3 NA coding upstream 172276 1043185 ~ 1045789 (+)
LOC122342042 LOC107746594,LOC107582328,LOC107686751 coding upstream 479143 729071 ~ 738922 (+)
LOC122337612 cd38,LOC107568972,LOC107693813 coding upstream 625724 567855 ~ 592341 (+)
LOC122347479 LOC107730391,LOC107653668,LOC107677846,LOC107555244,LOC107746981,LOC107559791 coding downstream 26429 1245163 ~ 1250334 (+)
LOC122347468 LOC107653668,LOC107730391,LOC107746981,LOC107559791,LOC107677846,LOC107555244,LOC107730385 coding downstream 27959 1246693 ~ 1261968 (+)
LOC122351641 NA coding downstream 109651 1328385 ~ 1331549 (+)
LOC122350806 NA coding downstream 116190 1334924 ~ 1346793 (+)
LOC122348945 LOC107718016,LOC107555266,LOC107568777,LOC107709315,LOC106575573,LOC108429863,LOC105889574 coding downstream 237352 1456086 ~ 1465285 (+)
G138 NA non-coding upstream 5922 1126766 ~ 1212143 (+)
G139 rap2ab,rap2a,LOC105911819,LOC106512668,LOC106582448,LOC105933629,LOC101166017,LOC103391592 non-coding upstream 66896 1148386 ~ 1151169 (+)
G162 kpnb3,ipo5,LOC107677849,LOC107653674,LOC107555240 non-coding upstream 89975 1126466 ~ 1128090 (+)
G141 NA non-coding upstream 134686 1050762 ~ 1083379 (+)
G128 NA non-coding upstream 307368 910489 ~ 910697 (+)
G207 NA non-coding downstream 110861 1329595 ~ 1336345 (+)
LOC122350990 NA non-coding downstream 139100 1357834 ~ 1402615 (+)
G217 NA non-coding downstream 165019 1383753 ~ 1384030 (+)
G203 atp1a1a.1,LOC107718011,LOC107698904,LOC107555257,LOC107653678,LOC107717912,LOC105923069 non-coding downstream 178165 1396899 ~ 1398974 (+)
G227 NA non-coding downstream 248751 1467485 ~ 1468131 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 97344 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 768425 445940 ~ 449640 (+)
G10 NA other upstream 1039865 177716 ~ 178200 (+)
LOC122327253 NA other downstream 220306 1439040 ~ 1441666 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 967087 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 1264906 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 1274838 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 1292838 2511572 ~ 2518385 (+)

Expression


Co-expression Network