G1698


Basic Information

Item Value
gene id G1698
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7647889 ~ 7648624 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2478
AGCAAACCGACCTCACTCCTATCACAGTGCGCTCCTTTGTGCGCAGATAGAGGGGCAACCTTGCGGCCTACAACTGCAGTTCAGCGTCCCTCCCAGGTGAAGAGACGGGGATGGGTGTACACTGCGGTCTCTGCGTTATGAATCCAGGGGAAAATGCACAGTAACCTCCATTAGGGGTCTGACAGAGGAGACCGAGCACACACGGTGTTGGCCACGATATTCTCAATCTCCATTGTCAGAAAAAAGATCCCATGCAGTCCCGATACATTTCACTTAGGAGAAAAAAAGACGAGGACGCTCGCGCTGTTGGTGAcggtgaggatgaggatgatgatcgGTGGTGAGGATGGTTGTGATCGGCGTGAATTTGGCGTTGGCACATTGCAGGTTAATTGTATTTCTCCATATCTCGCTGTTGAACCCCCCACCTTTCCGCTCGCAGTGGAcatgtactctctctctctcccccttgTTAGCATTCAGCGCTCAGCAGTCCTTCCTGTCTCGAGCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2478 True 513 lncRNA 0.42 2 7647889 7648624

Neighbor

gene id symbol gene type direction distance location
snx8b snx8b,LOC107692712,LOC107758890,LOC107565397,LOC107665942,LOC107723171 coding upstream 24073 7615995 ~ 7623816 (+)
LOC122351150 LOC107692714,LOC107577730 coding upstream 85602 7560832 ~ 7562287 (+)
si:dkey-26i13.8 si:dkey-26i13.8,LOC107723167,LOC107564186,LOC107665939,LOC107557933,LOC107758843 coding upstream 88477 7548351 ~ 7559412 (+)
LOC122350276 eif3b,LOC107692621,LOC107758884,LOC105890332 coding upstream 100209 7540403 ~ 7547680 (+)
knstrn knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 coding upstream 333452 7311397 ~ 7314437 (+)
tspan5b tspan5b,tsn5,LOC107692617,LOC107557938,LOC107758863,LOC108441323,LOC105893813,LOC103360687,LOC104950293 coding downstream 3098 7651722 ~ 7660532 (+)
slc24a2 slc24a2,LOC107692616,LOC107758891,LOC107665969,LOC107564132,LOC107557960,LOC108441320 coding downstream 14711 7663335 ~ 7680372 (+)
saraf LOC107758892,LOC107557959,LOC107665975,LOC107692614 coding downstream 32246 7680870 ~ 7684601 (+)
xpa xpa,LOC107758894,LOC107565010,LOC107692611,LOC107557957,LOC107723178 coding downstream 38751 7687375 ~ 7690927 (+)
LOC122343081 LOC107723175,LOC107692611,LOC107565010,LOC107665966,LOC107758893,LOC107557956 coding downstream 47787 7696411 ~ 7704131 (+)
G1697 NA non-coding upstream 19578 7624948 ~ 7628311 (+)
G1706 NA non-coding upstream 41389 7598267 ~ 7606500 (+)
G1677 NA non-coding upstream 65799 7513555 ~ 7582090 (+)
LOC122330513 NA non-coding upstream 239684 7401131 ~ 7408205 (+)
LOC122336506 NA non-coding upstream 326120 7318202 ~ 7321769 (+)
G1732 NA non-coding downstream 58261 7706885 ~ 7708131 (+)
G1751 NA non-coding downstream 157081 7805705 ~ 7806252 (+)
G1752 NA non-coding downstream 158727 7807351 ~ 7808014 (+)
G1750 LOC107692600 non-coding downstream 159679 7808303 ~ 7809221 (+)
G1753 NA non-coding downstream 162359 7810983 ~ 7811354 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 495669 7146873 ~ 7152220 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 787619 6846500 ~ 6860270 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other upstream 802341 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other upstream 865748 6771486 ~ 6782141 (+)
G1414 NA other upstream 1110932 6533502 ~ 6536957 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other downstream 71641 7720265 ~ 7721425 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other downstream 306087 7954711 ~ 7985615 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other downstream 958201 8606825 ~ 8607785 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other downstream 974534 8623158 ~ 8634399 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other downstream 1051816 8700440 ~ 8705873 (+)

Expression


Co-expression Network