G1868


Basic Information

Item Value
gene id G1868
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8138483 ~ 8167387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2701
TCCTGCTAGAGTTACATTTAACTCTATAGCAGTTCCAGACAATATCATTCTGTGCTGGAGGTTTTAGCGACGCCCACGTTTTGCTGATTAACAACGGCGGGCAGGCATTccctcatttaaaataatccatattcatcaaacattaaaaaagaagaGGTTTGTGGAAAAATATACCGGCATTGAAGTCACATCAGTAACAGGTTTCCTCAGGCAAAGATCTGGTTTGAAATGCATGGCTGCTCATGTACACACAAGATCACGCACCTTATCCTTTGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2701 True 279 lncRNA 0.42 2 8138483 8167387

Neighbor

gene id symbol gene type direction distance location
sclt1 sclt1,LOC107692600,LOC107665924,LOC107683335 coding downstream 320084 7805692 ~ 7818399 (-)
cplx2l cplx2l,LOC107692605,LOC107723185,LOC107665962,LOC107758899,LOC108241424,LOC103366469,LOC107390991 coding downstream 367957 7762381 ~ 7770526 (-)
b4galt1 LOC107692709,LOC107565367,LOC107758898,LOC107665944,LOC107557953,LOC108277608 coding downstream 408743 7722102 ~ 7729740 (-)
LOC122352459 mtp,LOC107557955,LOC107723195,LOC107564103,LOC107692610,LOC107665974 coding downstream 421158 7706885 ~ 7717325 (-)
pla2g12a LOC107692613,LOC107564125,LOC107665940,LOC107758864,LOC107557937 coding downstream 451628 7684099 ~ 7686855 (-)
pcdh18a LOC107751534,LOC107692598,LOC107564003,LOC107746447,LOC107557554 coding upstream 4950 8172337 ~ 8179576 (-)
elf2b elf2b,LOC107692595,LOC107702304,LOC107742505,LOC107714223,LOC107562959 coding upstream 305432 8472819 ~ 8490055 (-)
camk2d2 camk2d2,LOC107714220,LOC107563926,LOC107742503,LOC107702309,LOC107562980,LOC103354871,LOC108246882 coding upstream 398766 8566153 ~ 8598509 (-)
pde5aa LOC107692592,LOC107563895 coding upstream 441701 8609088 ~ 8622357 (-)
wfs1a wfs1a,LOC107565338,LOC107692704,LOC107742510 coding upstream 467174 8634561 ~ 8642497 (-)
LOC122341751 NA non-coding downstream 61096 8075175 ~ 8077387 (-)
G1845 pcdh10a,LOC107751533,LOC107665923,LOC107557555 non-coding downstream 154180 7953213 ~ 7984303 (-)
G1809 LOC107723197,LOC107692608,LOC107564078 non-coding downstream 341037 7743495 ~ 7797446 (-)
G1781 NA non-coding downstream 477951 7656078 ~ 7660532 (-)
G1663 NA non-coding downstream 822165 7315910 ~ 7316318 (-)
LOC122351284 NA non-coding upstream 279161 8446548 ~ 8448624 (-)
G2010 NA non-coding upstream 464077 8631464 ~ 8634397 (-)
G2016 NA non-coding upstream 502026 8669413 ~ 8670804 (-)
G2033 NA non-coding upstream 528485 8695872 ~ 8697401 (-)
G2034 NA non-coding upstream 533042 8700429 ~ 9005360 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 842654 7204004 ~ 7295829 (-)
G1642 NA other downstream 968461 7125642 ~ 7170022 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other downstream 1004201 7071589 ~ 7134282 (-)
LOC122342514 NA other downstream 1593925 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 1670229 6456044 ~ 6468254 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 324757 8492144 ~ 8500212 (-)
G1926 NA other upstream 388653 8556040 ~ 8607795 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other upstream 611825 8779212 ~ 8798355 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 2189794 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 2567583 10734970 ~ 10799609 (-)

Expression


Co-expression Network