ppp2r2ca (ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115)


Basic Information

Item Value
gene id ppp2r2ca
gene name ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8623158 ~ 8634399 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2833
GGCGTGGACAGTCTGGACTTCACGAAAAAGATTCTGCACATGGCTTGGCACCCGGCTGAAAACATCATTGCCATTGCAGCAACTAACAACCTCTACATCTTTCAGGACAGGGTTAATGCAGAAAACCTGTGACAAGAAACGCATTACGGGGTGCAATAATGCGCTTCACAGGagccacacacaaacaaacgtGCATCAGAATTATGATTTGGTCCTGTGGAGGTGGACGTAGTTGCCAGACCCTGAAAGTAAACAGATGGACTTTGCAGTTAAGCCATTCCAGGAGAGCAGTTATGTATAGCCAATGACTTTATCTGATAACTGTTGGTTAATTACACCGCCAAGAATGTTGCAGATGAGCTACGGTACATGGAATTTACATCACAGCTAGCCAATCCCGGACTGCTTTGATATGTGATGGATGGCGTTGTCGGCCAATCCCTGACTGCGCTGATCTGTGATTGACAGCCAATTTGGACTGAAGAACAGAAAATGAGACCGCTCGGCTCCTCTGTGCCAGGTTGCCATGGAGACAGGTTACTCAGTTGTCATGGTAACAAGAGTGCTCTGAGCAGTCTTCCTATCACGTGCTTCCCAAAAACTATCCCAAAATGCATCTGCTATACGAGCACTCATTTTACTTCACGTCAGAACATGGATGCCTATACGACCCAATCACTATATCTCGCACTTGGAGGAGGTTTGTTAAATTCCAGTACTTGTCTCATGCATCCTAAAGGAAGGATTGATCCACTACTTCATCAGAACACTGTCTTAACCTGGTTACACCTCATGATGGGTTACATTTACACCTGTatggtaagaaaaaaaagagggataTATCACACCACTAACACACTTTCAAAAAAGCAGATTCGTGCACGGTAACTGACAGGCGTTAGAGTCAAACTCTGATCTACACTCGGGTTACACAGACTACTGGGCTCTCACAGTAAAGCActgcctttttatttatgattgtAGCTACTCTACCGAACCCTCAAACGTAAATTTAAACAGCCATGTTGGAAATGgataaaagacataaaaaatatgtttgttaatttaaaaaatattacggTTAATGCTTTGACACAAACAATCATTTTGACATtactatattaattatatatatatatattaaaaacaaactgtagGGTAATGTACTTTCAATGGAAGTCTCTGGGTCATTCTGAAgggtttaaaagcaaaatgtggTGCAGcttgtatttttgttgaaatgctTATTTGAGCGGTTACCAACCTTTTTGACTACAAAGCCTATCATTGTCCACAAAAATATCTGAAGACCTCATTACTTGTACAGTTGTTTGTGACTCTAAGTAAggattttataaatattttttactcagAATTTATACCCAATAAAATAATTCAGAGCTTGGCATGATTAGAAGATAATGTATATTCATCATACTGTTTATCAGAGTTGTAagattttattaacattacatttgtgGGTCTAggcaaacacttttaaaattagGCTTCCTCATATATGCAGGTTCTACAGAATTGTAAGAATGCTGGTtgtttaaagataaaaacaagTTGAATCCGTTTATTTTAAAGGGGCGGTTGATTATGATGTTGCtgttagaaaataaatgtcTGCACTCAAAAGTTTGACACTCAAAGTTCAATGCAaagtgagatttttttcttaataaattgcTAAGAACTACAAAAAAGATTAGTAGGGACTACAACAAATACAAACAGTTTATATAgtttaatgcttgttttttctAATTCTAAGTCATCTATGTTGAGGCCTAGTGGCCCCCATTCCCTGGTGGAGAGCCACTGGGTTATATGTATTACTTCTTCTGAGGCTACACTTTTAAAgggtatttaatttttataccCCCTCTTTTGCTAATTCCTTGCTCCCTGGACTTCCATTAGAAGTGCATTAACATAGCTGAGGATGTGtcaaaaagtctaaaaatagctaaaatagcCTATCTTGTATTAAAGTTGGTACGTTCCAATGTGTAGCATCTAGGAAGCAGATAAACCATGTGTAAATGTGAATCTCTGCACACTGTGTTTTCTAAGACCACACAGGTGTACATGTAACTCTCGATCCACTGTAGAAAGAACACGGCGAGTTATCTTTCGTTTAAGGTGCCATTCACCTTCTGGGTGACTGTTTGTTTGGTGTAGATGTGGTGATGAATTGTTGGGTGTCTGTGTAGACTATGACACCAAGGTCAGTGATTGTTTTTGCTATATGAACAAGGCTGAATGAATGTAACAAGCTTTTAATGAAtccatttttaaagtgttatgaTGTTAACGGGGTGCTCTCAAACTGACGAGCGagcttgcttgcttgcttgctttctcattttctttgaCTTCGTcccttttctgtcttttctggTGTTCACGTGTTTGTCTGTCCCATTTTTCTAGTACACTTTGCTCTACATATACTGAGGCTGTGCCTCTTACAACTGGTCCCTCTActcttatttttacatttgtagttCATTCACATCATTTTTGTACCCTGAGACAATGATTCTCTGCTTTTTTCACTCtgttcctttctttctctcgcaCACTTTCATTCTCTTACATCCTGTTACCATGGCGATAGGCCTTCTGCCATTATGCATTCTCTCATGCTTTCTCTCAGACATGcagtgaaacacacacattcacagtgCGACCAGGGAATAATAGCTTGAGTTTTTCAgggcacacacacgcactctctcacaaacacacacacaaataggcCTATACATGCAAGCATACACACAAAAACGCATGTTTATCATTATCCAGTGTTACTAATGTGTATATCTATGATGCCTAAACATATTCTATTGACacttaatggaaaaataaaagaggCAAATGGAGGAATGTGATTAAATTAATATGACCTCTGTA
>XM_043237640.1
TGGGACAGCACGGATTGGACGGCTCTTCTCCGGACGGGCGCGCTTACGCACTCCGCCGCTTCCGATGGGTGAGGACGGCGAGAGCTCCAAAATCAATCACAGCTTCCTCCGAGACTATGTCACAGAAGCTGATGTCATTTCTACAGTGGAGTTTAACCAGACGGGGGATCTGCTGGCCACAGGGGATAAGGGGGGGCGAGTGGTCATCttccagagagagacagagTCTAAAGGTGAATCTGAGGAGCTGGGAGAATCTGGTGAGTATAATGTCTACAGTACGTTCCAGAGCCATGAACCGGACTTCGACTACCTGAAGAGTTTGGAGATTGAGGAGAAGATCAATAAGATCCGCTGGCTGCCACAGCAAAACGCTGCCCACTTTCTCCTCTCTACCAACGATAAAACGATAAAGCTATGGAAGGTGAGCGAGAGAGACAAGCGGCCAGAGGGCTACAATCTGAAGGACGAAGAAGGGCGAATAAAGGACATCTCCACCGTGACCTCATTACGGGTGCCAGTCCTGAAGCCCACTGACCTGATGGTTGAGGTACGGCCGAGGAGAATCTTTGCCAACGGCCACACCTACCACGTCAACTCCATCTCAGTCAATAGCGATGGCGAGACATATCTGTCTGCCGATGATCTCAGGATCAATATGTGGCACCTGGATATCACAGATCGAAGCTTCAACATTGTGGACATTAAGCCAGCCAATATGGAGGACCTGACGGAGGTGATAACAGCTGCAGAGTTCCACCCACAGCACTGCCACCTGTTTGTATACAGCAGCAGTAAAGGCACGCTACGCCTCTGTGACATGAGAGAGTCGGCACTCTGTGACAAGCACTCCAAAATCTTTGAGGAGCCAGAGGACCCAGGCAATCGATCTTTCTTCTCTGAGATCATCTCGTCGGTTTCTGATGTAAAGTTTAGCCATAGTGGACGTTATCTGCTCACTAGAGACTACTTGACTGTCAAAGTATGGGACCTCAACATGGAGAAGGGCCCTGTAGAGACCTACCAGGTTCACGAGTACCTACGAAGCAAACTCTGCTCTTTGTATGAAAACGACTGCATCTTTGAcaagtttgagtgtgtgtggaaCAGCACAGACAGTGTAATCATGACAGGAGCGTATAACAGTTTTTTCCGGATGTTCGATCGCGAGACCGGTCGCGGTGTAACCCTGGAGGCATGGCGCGAAAGCAGTAAACCTCGCGCCGTGCTGCGTCTTTATCGTGTTTATACCGGGGCTAAACCTCGGGACCGGTGGCGTGGCGTGGACAGTCTGGACTTCACGAAAAAGATTCTGCACATGGCTTGGCACCCGGCTGAAAACATCATTGCCATTGCAGCAACTAACAACCTCTACATCTTTCAGGACAGGGTTAATGCAGAAAACCTGTGACAAGAAACGCATTACGGGGTGCAATAATGCGCTTCACAGGagccacacacaaacaaacgtGCATCAGAATTATGATTTGGTCCTGTGGAGGTGGACGTAGTTGCCAGACCCTGAAAGTAAACAGATGGACTTTGCAGTTAAGCCATTCCAGGAGAGCAGTTATGTATAGCCAATGACTTTATCTGATAACTGTTGGTTAATTACACCGCCAAGAATGTTGCAGATGAGCTACGGTACATGGAATTTACATCACAGCTAGCCAATCCCGGACTGCTTTGATATGTGATGGATGGCGTTGTCGGCCAATCCCTGACTGCGCTGATCTGTGATTGACAGCCAATTTGGACTGAAGAACAGAAAATGAGACCGCTCGGCTCCTCTGTGCCAGGTTGCCATGGAGACAGGTTACTCAGTTGTCATGGTAACAAGAGTGCTCTGAGCAGTCTTCCTATCACGTGCTTCCCAAAAACTATCCCAAAATGCATCTGCTATACGAGCACTCATTTTACTTCACGTCAGAACATGGATGCCTATACGACCCAATCACTATATCTCGCACTTGGAGGAGGTTTGTTAAATTCCAGTACTTGTCTCATGCATCCTAAAGGAAGGATTGATCCACTACTTCATCAGAACACTGTCTTAACCTGGTTACACCTCATGATGGGTTACATTTACACCTGTatggtaagaaaaaaaagagggataTATCACACCACTAACACACTTTCAAAAAAGCAGATTCGTGCACGGTAACTGACAGGCGTTAGAGTCAAACTCTGATCTACACTCGGGTTACACAGACTACTGGGCTCTCACAGTAAAGCActgcctttttatttatgattgtAGCTACTCTACCGAACCCTCAAACGTAAATTTAAACAGCCATGTTGGAAATGgataaaagacataaaaaatatgtttgttaatttaaaaaatattacggTTAATGCTTTGACACAAACAATCATTTTGACATtactatattaattatatatatatatattaaaaacaaactgtagGGTAATGTACTTTCAATGGAAGTCTCTGGGTCATTCTGAAgggtttaaaagcaaaatgtggTGCAGcttgtatttttgttgaaatgctTATTTGAGCGGTTACCAACCTTTTTGACTACAAAGCCTATCATTGTCCACAAAAATATCTGAAGACCTCATTACTTGTACAGTTGTTTGTGACTCTAAGTAAggattttataaatattttttactcagAATTTATACCCAATAAAATAATTCAGAGCTTGGCATGATTAGAAGATAATGTATATTCATCATACTGTTTATCAGAGTTGTAagattttattaacattacatttgtgGGTCTAggcaaacacttttaaaattagGCTTCCTCATATATGCAGGTTCTACAGAATTGTAAGAATGCTGGTtgtttaaagataaaaacaagTTGAATCCGTTTATTTTAAAGGGGCGGTTGATTATGATGTTGCtgttagaaaataaatgtcTGCACTCAAAAGTTTGACACTCAAAGTTCAATGCAaagtgagatttttttcttaataaattgcTAAGAACTACAAAAAAGATTAGTAGGGACTACAACAAATACAAACAGTTTATATAgtttaatgcttgttttttctAATTCTAAGTCATCTATGTTGAGGCCTAGTGGCCCCCATTCCCTGGTGGAGAGCCACTGGGTTATATGTATTACTTCTTCTGAGGCTACACTTTTAAAgggtatttaatttttataccCCCTCTTTTGCTAATTCCTTGCTCCCTGGACTTCCATTAGAAGTGCATTAACATAGCTGAGGATGTGtcaaaaagtctaaaaatagctaaaatagcCTATCTTGTATTAAAGTTGGTACGTTCCAATGTGTAGCATCTAGGAAGCAGATAAACCATGTGTAAATGTGAATCTCTGCACACTGTGTTTTCTAAGACCACACAGGTGTACATGTAACTCTCGATCCACTGTAGAAAGAACACGGCGAGTTATCTTTCGTTTAAGGTGCCATTCACCTTCTGGGTGACTGTTTGTTTGGTGTAGATGTGGTGATGAATTGTTGGGTGTCTGTGTAGACTATGACACCAAGGTCAGTGATTGTTTTTGCTATATGAACAAGGCTGAATGAATGTAACAAGCTTTTAATGAAtccatttttaaagtgttatgaTGTTAACGGGGTGCTCTCAAACTGACGAGCGagcttgcttgcttgcttgctttctcattttctttgaCTTCGTcccttttctgtcttttctggTGTTCACGTGTTTGTCTGTCCCATTTTTCTAGTACACTTTGCTCTACATATACTGAGGCTGTGCCTCTTACAACTGGTCCCTCTActcttatttttacatttgtagttCATTCACATCATTTTTGTACCCTGAGACAATGATTCTCTGCTTTTTTCACTCtgttcctttctttctctcgcaCACTTTCATTCTCTTACATCCTGTTACCATGGCGATAGGCCTTCTGCCATTATGCATTCTCTCATGCTTTCTCTCAGACATGcagtgaaacacacacattcacagtgCGACCAGGGAATAATAGCTTGAGTTTTTCAgggcacacacacgcactctctcacaaacacacacacaaataggcCTATACATGCAAGCATACACACAAAAACGCATGTTTATCATTATCCAGTGTTACTAATGTGTATATCTATGATGCCTAAACATATTCTATTGACacttaatggaaaaataaaagaggCAAATGGA

Function

symbol description
ppp2r2ca Predicted to enable protein phosphatase regulator activity. Predicted to be involved in peptidyl-serine dephosphorylation. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Orthologous to human PPP2R2C (protein phosphatase 2 regulatory subunit Bgamma).

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process
GO:0007165 signal transduction biological_process
GO:0000159 protein phosphatase type 2A complex cellular_component

KEGG:

id description
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
TU2833 False 2928 lncRNA 0.46 1 8631472 8634399
XM_043237640.1 True 4176 mRNA 0.43 11 8623158 8634368

Neighbor

gene id symbol gene type direction distance location
ank2a LOC107564962,LOC107692594 coding upstream 57064 8505599 ~ 8566094 (+)
LOC122344791 zgc:101819,LOC107565358,LOC107692706,LOC107714206,LOC107562979,LOC107702306 coding upstream 117805 8500674 ~ 8505353 (+)
noctb LOC107742507,LOC107692596,LOC107702303,LOC107714224 coding upstream 151652 8463831 ~ 8471506 (+)
c1h4orf33 LOC107557949,LOC107564032,LOC107758903,LOC107692602,LOC107723188,LOC107665957 coding upstream 801810 7818423 ~ 7821348 (+)
clta clta,LOC107723183,LOC107564055,LOC107692603,LOC107557948,LOC107758902 coding upstream 818196 7797156 ~ 7804962 (+)
crmp1 crmp1,LOC107742497,LOC107714216,LOC107702260,LOC107564953,LOC107562962,LOC105903535 coding downstream 9060 8643459 ~ 8654328 (+)
LOC122350473 LOC107692703,LOC107742499,LOC107562963,LOC107702261,LOC107714199,LOC107563851 coding downstream 21137 8655536 ~ 8660047 (+)
fip1l1b fip1l1b,LOC107692590,LOC107742498,LOC107702315,LOC107714215 coding downstream 26336 8660735 ~ 8668619 (+)
chic2 chic2,LOC103353160,LOC101486940,LOC107742496,LOC107714214,LOC107562985 coding downstream 34997 8669396 ~ 8673653 (+)
slc34a2a slc34a2a,LOC107657019,LOC107742514,LOC107565308,LOC107714203,LOC107562975 coding downstream 46190 8680589 ~ 8686545 (+)
G1902 camk2d2,LOC107563926,LOC107742503,LOC107714220,LOC107562980 non-coding upstream 44797 8525581 ~ 8578361 (+)
G1885 LOC107702304,LOC107562959,LOC107742505 non-coding upstream 148637 8395325 ~ 8474521 (+)
trnaa-agc_1 NA non-coding upstream 159814 8463272 ~ 8463344 (+)
trnaa-agc NA non-coding upstream 160707 8462379 ~ 8462451 (+)
G1754 NA non-coding upstream 809507 7812153 ~ 7813651 (+)
G1968 NA non-coding downstream 61558 8695957 ~ 8697410 (+)
G1971 NA non-coding downstream 77775 8712174 ~ 8714035 (+)
G1977 LOC107758879 non-coding downstream 95658 8730057 ~ 8730394 (+)
G1979 NA non-coding downstream 106433 8740832 ~ 8742521 (+)
LOC122352408 NA non-coding downstream 396424 9030823 ~ 9031823 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other upstream 15373 8606825 ~ 8607785 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other upstream 637543 7954711 ~ 7985615 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other upstream 901733 7720265 ~ 7721425 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 1470938 7146873 ~ 7152220 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 1762888 6846500 ~ 6860270 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other downstream 66041 8700440 ~ 8705873 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other downstream 127740 8762139 ~ 8780164 (+)
G2063 NA other downstream 400687 9035086 ~ 9035600 (+)
G2125 NA other downstream 774006 9408405 ~ 9412437 (+)
G2230 NA other downstream 1610758 10245157 ~ 10245578 (+)

Expression


Co-expression Network