stim2a (stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330)


Basic Information

Item Value
gene id stim2a
gene name stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8700440 ~ 8705873 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU2848
TAGCGAGCGCGCGGTCGGCGTTAGAAGAGCAGACGCACGCAAAGCTCGCCGATATTTAGTAACAAGAACACTTTCATGGACGCTCGTTATCCGAACGTTCCTGAAGAGAAGCCGGCTGCAGTCGTCAAGCAACTTCGTTCACAAGGAACCCTGCTTTCTCAAGGACTACTCTTTGCCGTCGCGTTTTTGTTCTGGACTCGTTCTTAAAGTGGAAGACGTTATTTTGCTATTTGTTCCCCAAAGTTATGTCCGTTATTCTGTTCGCTTTATTTTTCCATTGCTTTGGAATATAAGGAAgccgtttaaaaaaacaaacaaacaaaaaaaaaacttttgggatttatttgcctttttaaatgctttgatCTGCACTTTGGCGGTTGCGAAGGAACATTTCAAACTTTTctcgttgtgtgtgtgtgtgtgcgtgaaatGTCTACACTGTTGCTTTTCTAACCGAAGCTTGGAGCTGGAGCTGTTTATAGCATCACTATCACATAACGTTGCATTTGGACGCACATGTGTTTTTTAGATCATAGACAGTAAGCGGCACTTGAACCCTGCGATGCATAAGTTCTGCCTGACCGTACTGCTCGTGCTGCGCGGACTCATCATCTGCGTCTGTTCCAGCGATGAACCACATCACCCCGGGCTGTACAAGGACGCGACTGCGACCCCGACAGATCCATGTCTGCAAGTGATCCCTCCGTGTATGACAGAGGCTGATCGCTTCAGCCTGGAGGCTCTTCAGCACATCCACAGAGAGATGGACGATGATCAGGATGGAGGCATTGAGGTGGAG
>XM_043228024.1
GTTAGAAGAGCAGACGCACGCAAAGCTCGCCGATATTTAGTAACAAGAACACTTTCATGGACGCTCGTTATCCGAACGTTCCTGAAGAGAAGCCGGCTGCAGTCGTCAAGCAACTTCGTTCACAAGGAACCCTGCTTTCTCAAGGACTACTCTTTGCCGTCGCGTTTTTGTTCTGGACTCGTTCTTAAAGTGGAAGACGTTATTTTGCTATTTGTTCCCCAAAGTTATGTCCGTTATTCTGTTCGCTTTATTTTTCCATTGCTTTGGAATATAAGGAAgccgtttaaaaaaacaaacaaacaaaaaaaaaacttttgggatttatttgcctttttaaatgctttgatCTGCACTTTGGCGGTTGCGAAGGAACATTTCAAACTTTTctcgttgtgtgtgtgtgtgtgcgtgaaatGTCTACACTGTTGCTTTTCTAACCGAAGCTTGGAGCTGGAGCTGTTTATAGCATCACTATCACATAACGTTGCATTTGGACGCACATGTGTTTTTTAGATCATAGACAGTAAGCGGCACTTGAACCCTGCGATGCATAAGTTCTGCCTGACCGTACTGCTCGTGCTGCGCGGACTCATCATCTGCGTCTGTTCCAGCGATGAACCACATCACCCCGGGCTGTACAAGGACGCGACTGCGACCCCGACAGATCCATGTCTGCAAGTGATCCCTCCGTGTATGACAGAGGCTGATCGCTTCAGCCTGGAGGCTCTTCAGCACATCCACAGAGAGATGGACGATGATCAGGATGGAGGCATTGAGGTGGAGAGCGTTGAGTTCATCATTGAAGATatgcagcagcaacaacagaCCAACAAACATAGTAAACTCCATCACGAGGACCAGCATATAACTTTGGAGGAGCTTTGGAAGGGCTGGAAATCTTCTGAAGTTCATAACTGGACTCAGGAGGATGTCTTGAGGTGGTTAAGAGAGTTTGTTGAGTTGCCTCAGTATGAAAAGAGCTTCAAAGAGCTGCGTGTCAATGGGAACACCTTGCCCAGGATTGCTTCCCATGAGCCATCATTTATGAGCACATATCTGAAGATACAAGACcagcaacacaaacaaaaactcaaGCTCAAAGCCCTGGATGTAGTGCTGTTTGGCCCACCTACACGACCCCCACACAACTGGATGAAAGACCTGGTTCTGATAGTGTCTGTTGTAATGGGGATTGGTGGATGCTGGTTTGCACGAGTACAGAATAAAGCATCTAagattcatatttcaaaaatgatgAAGGACCTTGAAAGCTTGCAGAGAGCTGAACAAAGCCTCAGAGACTTACAGGAGCAgttggAAAAGGCCCAGGAAGAGAAGCGCACAGTGGCGGTAGAGAAGAAGAATCTAGAAGAAAAGATGAGGGATGAGATTCAGGGTGCTCAGGAAGAGGCCAACCGCCTGCACAGACTCCGAGATGGAGCAGTGAGTGAACTAACCCGTCTTCGGTATGCAGAAGAAGAGCTTGAACAGGTGCGTGATGCTCTGAAGAGGGCAGAGAAAGACATGCAGTGCCTCTGGTCAGTTCCTGAATCTTTGCAGCTGTGGCTACAGCTCACCCATGAGGTAGAGGTCCAGTACTACAACGTCAAGAAGCAAAGTGCAGAACAACAACTAGTCACGGCTAAAGATGAGGCTGAGAAGATCAAAAAAAGGAGTTCTGTTTTGAGTACGCTACATGTCGCACATAGCTCCTCATTGGATCAAGTGGATCAGAGAATTCTGGAGGCCAAGTAATTTGtttattctcattttaaacTTAAGACACTGAATACATAATGTATTTTCAATATGGGTCCGAACACTTTTTGGGCTAGTGCATGTATGCTGAATTTCAAATGTCAAATTTCAAGAAAATATCTGATTCTGAAATATCTGGGTTTACAATGACCAGCATACTGTA

Function

symbol description
stim2a Predicted to enable calcium channel regulator activity and metal ion binding activity. Predicted to act upstream of or within calcium ion transport. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brain; head; liver; pleuroperitoneal region; and skeletal muscle. Orthologous to human STIM2 (stromal interaction molecule 2).

NR:

description
PREDICTED: stromal interaction molecule 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2848 False 802 TUCP 0.38 2 8700440 8701372
XM_043228024.1 True 1921 mRNA 0.45 11 8700459 8705873

Neighbor

gene id symbol gene type direction distance location
rbpja rbpja,LOC107563830,LOC107742494,LOC107702317,LOC107562987 coding upstream 5891 8691140 ~ 8694549 (+)
slc34a2a slc34a2a,LOC107657019,LOC107742514,LOC107565308,LOC107714203,LOC107562975 coding upstream 13895 8680589 ~ 8686545 (+)
chic2 chic2,LOC103353160,LOC101486940,LOC107742496,LOC107714214,LOC107562985 coding upstream 26787 8669396 ~ 8673653 (+)
fip1l1b fip1l1b,LOC107692590,LOC107742498,LOC107702315,LOC107714215 coding upstream 31821 8660735 ~ 8668619 (+)
LOC122350473 LOC107692703,LOC107742499,LOC107562963,LOC107702261,LOC107714199,LOC107563851 coding upstream 40393 8655536 ~ 8660047 (+)
LOC122350130 fgf20a,fgf20,LOC107747399,LOC107721420,LOC107702330,LOC107657011,LOC107562923,LOC106602193 coding downstream 94444 8800317 ~ 8802624 (+)
LOC122352717 NA coding downstream 337624 9043497 ~ 9044968 (+)
pcdh7a pcdh7a,LOC107742492,LOC107656832,LOC107702324,LOC107750039,LOC107562921,LOC108415078,LOC105908367 coding downstream 492011 9197884 ~ 9229837 (+)
itln1 NA coding downstream 528153 9234026 ~ 9236917 (+)
hgsnat hgsnat,LOC107565475,LOC107656620,LOC107702325,LOC107562920 coding downstream 531820 9237693 ~ 9252170 (+)
G1968 NA non-coding upstream 3030 8695957 ~ 8697410 (+)
G1902 camk2d2,LOC107563926,LOC107742503,LOC107714220,LOC107562980 non-coding upstream 122079 8525581 ~ 8578361 (+)
G1885 LOC107702304,LOC107562959,LOC107742505 non-coding upstream 225919 8395325 ~ 8474521 (+)
trnaa-agc_1 NA non-coding upstream 237096 8463272 ~ 8463344 (+)
trnaa-agc NA non-coding upstream 237989 8462379 ~ 8462451 (+)
G1971 NA non-coding downstream 6301 8712174 ~ 8714035 (+)
G1977 LOC107758879 non-coding downstream 24184 8730057 ~ 8730394 (+)
G1979 NA non-coding downstream 34959 8740832 ~ 8742521 (+)
LOC122352408 NA non-coding downstream 324950 9030823 ~ 9031823 (+)
LOC122352814 NA non-coding downstream 346035 9051908 ~ 9053473 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other upstream 66041 8623158 ~ 8634399 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other upstream 92655 8606825 ~ 8607785 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other upstream 714825 7954711 ~ 7985615 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other upstream 979015 7720265 ~ 7721425 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 1548220 7146873 ~ 7152220 (+)
LOC122342651 LOC107702307,LOC103385245,LOC102791586,LOC107103578,LOC107559840 other downstream 56266 8762139 ~ 8780164 (+)
G2063 NA other downstream 329213 9035086 ~ 9035600 (+)
G2125 NA other downstream 702532 9408405 ~ 9412437 (+)
G2230 NA other downstream 1539284 10245157 ~ 10245578 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other downstream 1550789 10256662 ~ 10335202 (+)

Expression


Co-expression Network