G227


Basic Information

Item Value
gene id G227
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1467485 ~ 1468131 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU321
taaaaaaatgcctgtGTTTGACACACCTCTGGTTATGATGGTGATTCGATGGCTCAGTGTGCGGTTCATCAACTTGTGAAGCTCTTCAAGAGCACCCAGCATCTTCACCAGCTCCTCCCGAGCGGTGACCGGGTCCGATCGGTCGGCCGCTGGCGGAGTGTCGTTTTCGTTTGAATCGATCGGCTTTGACGGTCTGAGCGGTCGGTTCTTCTCGGCATGCCGCTGGGAATCAGGTGAGCGGGTCGTGCGGTCGGTCCTCGGAGAACCATCACGAATCTCCTCGTGTCCTTCAGAAAGAAGAGTTAGTGGCTTAAGTGTATTATTGACACCCGTGTCTGAGGTTCTGTGTCTGATGTTTGGGCCGCTTGTCGCTGCAATCGTTTCGTCTAATGCTTTCATGGCTACGGTTTTTCCATCTCCGTCCGGAGATGTCGTCATCGGTCTGGTCTTCAGTAGCTTCTCAAGAATCCTCGTCGCTTGCGCTGCATCTTCCTCAGCGTTTCTCCACGGATCTGAAAGGAAATAACAGCATTTTGAATCCGTTAAAGCAAGTGCATCCAGAGACTTCGGTGTCCCTTTGGAGTTATGCGTCGCCGCCAAAAACTAAACGGCTTTCATAACCGCTCTCCACCTTTGGCGGGAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU321 True 647 lncRNA 0.38 1 1467485 1468131

Neighbor

gene id symbol gene type direction distance location
LOC122348945 LOC107718016,LOC107555266,LOC107568777,LOC107709315,LOC106575573,LOC108429863,LOC105889574 coding upstream 2200 1456086 ~ 1465285 (+)
LOC122350806 NA coding upstream 120692 1334924 ~ 1346793 (+)
LOC122351641 NA coding upstream 135936 1328385 ~ 1331549 (+)
LOC122347468 LOC107653668,LOC107730391,LOC107746981,LOC107559791,LOC107677846,LOC107555244,LOC107730385 coding upstream 205517 1246693 ~ 1261968 (+)
LOC122347479 LOC107730391,LOC107653668,LOC107677846,LOC107555244,LOC107746981,LOC107559791 coding upstream 217151 1245163 ~ 1250334 (+)
runx1 runx1,LOC107555250,LOC107698911,LOC108429862,LOC107653683,LOC107571884 coding downstream 56976 1525107 ~ 1570888 (+)
LOC122347221 LOC107751081,LOC107698893,LOC107555241 coding downstream 106487 1574618 ~ 1583412 (+)
LOC122343461 NA coding downstream 116481 1584612 ~ 1591930 (+)
zgc:152904 zgc:152904,ncam2,LOC107698913,LOC107751079,LOC107721821 coding downstream 243911 1712042 ~ 1893196 (+)
LOC122345473 LOC107751076,LOC107593744,LOC107698914,LOC100332351 coding downstream 469319 1937450 ~ 1941621 (+)
LOC122350990 NA non-coding upstream 64870 1357834 ~ 1402615 (+)
G203 atp1a1a.1,LOC107718011,LOC107698904,LOC107555257,LOC107653678,LOC107717912,LOC105923069 non-coding upstream 68511 1396899 ~ 1398974 (+)
G217 NA non-coding upstream 83455 1383753 ~ 1384030 (+)
G207 NA non-coding upstream 131140 1329595 ~ 1336345 (+)
G175 NA non-coding upstream 248751 1218065 ~ 1218734 (+)
G270 NA non-coding downstream 17015 1485146 ~ 1485643 (+)
G273 LOC107698895,LOC107555251,LOC107751082 non-coding downstream 73191 1541322 ~ 1611176 (+)
G312 NA non-coding downstream 437521 1905652 ~ 1905963 (+)
G318 NA non-coding downstream 462526 1930657 ~ 1991767 (+)
G319 NA non-coding downstream 463685 1931816 ~ 1933144 (+)
LOC122327253 NA other upstream 25819 1439040 ~ 1441666 (+)
G136 kpnb3,ipo5,LOC107730386,LOC107677849,LOC107555240,LOC107653674 other upstream 346764 1119719 ~ 1120721 (+)
LOC122341994 NA other upstream 1017845 445940 ~ 449640 (+)
G10 NA other upstream 1289285 177716 ~ 178200 (+)
cyyr1 cyyr1,LOC107751099,LOC107698919,LOC107593871 other downstream 717690 2185821 ~ 2192464 (+)
grtp1a grtp1,grtp1a,LOC107571994 other downstream 1015509 2483640 ~ 2489103 (+)
setdb2 LOC107570068 other downstream 1025441 2493572 ~ 2558527 (+)
pcid2 pcid2 other downstream 1043441 2511572 ~ 2518385 (+)
G474 f10,LOC107654567,LOC107694470,LOC107751061,LOC107747060 other downstream 1056394 2524525 ~ 2527244 (+)

Expression


Co-expression Network