G2511


Basic Information

Item Value
gene id G2511
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11633926 ~ 11634160 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3657
gaaatatttattgcttTGAGTCAATGcaattttcatttaagtttcATTTACTCTAAAGTTAGTggtttaatggtttaataaagTCTTTAGCTCATCAAGGTTGCacttatgttaacaaaaatacagtgcaaacagtaaaatgtcattacatctgtttttttgttttaatacatttttttaatgttgttgttttttattgcagtttaatTTCCTCTGATAGCAAAGCTAAATTCTG

Function

GO:

id name namespace
GO:0009615 response to virus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3657 True 235 lncRNA 0.53 1 11633926 11634160

Neighbor

gene id symbol gene type direction distance location
tyrp1b tyrp1b,LOC107656198,LOC107551586,LOC107591533,LOC107702360 coding upstream 26728 11599279 ~ 11607198 (+)
ptpn9b LOC107551593,LOC107746013,LOC107702357,LOC107754144,LOC107591531 coding upstream 118240 11498583 ~ 11515686 (+)
exosc9 exosc9,LOC107656918,LOC107746036,LOC107591532,LOC107702358 coding upstream 135817 11494289 ~ 11498109 (+)
limch1a LOC107754143,LOC107656319,LOC107591530,LOC107746015,LOC107702273,LOC107551594 coding upstream 144348 11446738 ~ 11489578 (+)
rnf38 rnf38,LOC107656328,LOC107591527,LOC107754141,LOC107702356,LOC107551561 coding upstream 190461 11417077 ~ 11443465 (+)
clockb LOC107656111,LOC107591535,LOC107702364,LOC107754154 coding downstream 8359 11642519 ~ 11654574 (+)
clrn2 clrn2,LOC107746045,LOC107702302,LOC107754181,LOC107551567,LOC107591582,LOC107656264 coding downstream 40840 11675000 ~ 11676787 (+)
exoc1l si:dkey-245p14.4,LOC107591538,LOC107754188,LOC107551572,LOC107656282,LOC107746044,LOC107702277 coding downstream 47996 11682156 ~ 11683862 (+)
smc2 smc2,LOC107656012,LOC107702366 coding downstream 50194 11684354 ~ 11693285 (+)
LOC122352858 NA coding downstream 95798 11729958 ~ 11731028 (+)
G2472 NA non-coding upstream 248913 11383797 ~ 11385013 (+)
G2468 NA non-coding upstream 250539 11383031 ~ 11383387 (+)
G2454 NA non-coding upstream 282269 11350900 ~ 11351657 (+)
G2449 NA non-coding upstream 292178 11339295 ~ 11341748 (+)
G2430 NA non-coding upstream 318572 11310593 ~ 11315354 (+)
G2512 NA non-coding downstream 1328 11635488 ~ 11635889 (+)
G2518 NA non-coding downstream 43923 11678083 ~ 11678450 (+)
G2623 NA non-coding downstream 104824 11738984 ~ 11745961 (+)
G2625 NA non-coding downstream 110716 11744876 ~ 11763334 (+)
G2645 NA non-coding downstream 135283 11769443 ~ 11770585 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 652570 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 1143842 10483640 ~ 10490084 (+)
G2253 NA other upstream 1235886 10397373 ~ 10398040 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other upstream 1298724 10256662 ~ 10335202 (+)
G2230 NA other upstream 1388348 10245157 ~ 10245578 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other downstream 77780 11711940 ~ 11724900 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other downstream 139796 11773956 ~ 11783070 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other downstream 203446 11837606 ~ 11844060 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 1010519 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 1025102 12659262 ~ 12724458 (+)

Expression


Co-expression Network