LOC122343263


Basic Information

Item Value
gene id LOC122343263
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11395734 ~ 11396576 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3713
CTCACTGAGCTAGCGGTCAGGCTgtgttgtttaaatatatacacgtgtCCAAGCAAGAATCCTTCTCTGTGTCTCCCACAACTTGTGTGTTGTTCTTCAACAGtaaaAAAAACTGAAACGATGGCTGACAAACCAGATATCAGTGAGATCTCTCAGTTTGACAAGACCAAGCTGAAGAAGACCGAGACAAAAGAGAAGAACACACTTCCAACTAAAGAGACCATTGAACAGGAGAAACAATGTGAGACATAAACTATCTTCACCAAGGGCAAGATGTGGAGAACTGTGAGATGGCAGGTCCCTTTAAGTAGAAGATGGCTTCTCCCAACCACCAGTCACTATAGCCTTAGGCTGGAATGGAATATTTGCCCTCATAGTTTTAACTTGTGTATCAGACCATCCCTGAGATGACTGACTTCATGATGATCATCACTATAGTATGGTCACTGAAGTGGCAGTCAGACTTGCACTGAGGCTGTTTAACTCTGTTCTTTTGTAAATCCACTTGAATGaagaaaatgagttttatttgCCCTCTTTGGTGAAATAAACCTTTCAAATGAA
>XM_043237659.1
TGATCAACAGCTTGCACCTGCAATAGCAGGGTGATTAAATTGTTCCTCACTGAGCTAGCGGTCAGGCTgtgttgtttaaatatatacacgtgtCCAAGCAAGAATCCTTCTCTGTGTCTCCCACAACTTGTGTGTTGTTCTTCAACAGtaaaAAAAACTGAAACGATGGCTGACAAACCAGATATCAGTGAGATCTCTCAGTTTGACAAGACCAAGCTGAAGAAGACCGAGACAAAAGAGAAGAACACACTTCCAACTAAAGAGACCATTGAACAGGAGAAACAATGTGAGACATAAACTATCTTCACCAAGGGCAAGATGTGGAGAACTGTGAGATGGCAGGTCCCTTTAAGTAGAAGATGGCTTCTCCCAACCACCAGTCACTATAGCCTTAGGCTGGAATGGAATATTTGCCCTCATAGTTTTAACTTGTGTATCAGACCATCCCTGAGATGACTGACTTCATGATGATCATCACTATAGTATGGTCACTGAAGTGGCAGTCAGACTTGCACTGAGGCTGTTTAACTCTGTTCTTTTGTAAATCCACTTGAATGaagaaaatgagttttatttgCCCTCTTTGGTGAAATAAACCTTTCAAATGAA

Function

GO:

id name namespace
GO:0003006 developmental process involved in reproduction biological_process
GO:0046332 SMAD binding molecular_function
GO:0070412 R-SMAD binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3713 False 564 lncRNA 0.41 3 11395734 11396531
XM_043237659.1 True 609 mRNA 0.41 3 11395734 11396576

Neighbor

gene id symbol gene type direction distance location
pgm2 pgm2,LOC107551595,LOC107591526,LOC107746017 coding downstream 1908 11383791 ~ 11393826 (-)
tbc1d1 tbc1d1,LOC107754138,LOC107656363,LOC107702353,LOC107746016 coding downstream 13377 11336559 ~ 11382357 (-)
klf3 klf12,LOC107565970,LOC107656370,LOC107754179,LOC107702350,LOC107746019 coding downstream 71396 11310593 ~ 11324338 (-)
fam114a1 LOC107754137,LOC107656378,LOC107702351,LOC107746018,LOC107591522 coding downstream 85612 11302481 ~ 11310122 (-)
LOC122347963 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding downstream 409715 10982094 ~ 10986019 (-)
phox2ba LOC107551569,LOC107754147,LOC107656929 coding upstream 93376 11489952 ~ 11492033 (-)
trnai-aau NA coding upstream 101709 11498285 ~ 11498358 (-)
rbm47 rbm47,LOC107656158,LOC107754149,LOC107702361,LOC107746010 coding upstream 211985 11608561 ~ 11631643 (-)
lap3 lap3,LOC107754151,LOC107656223,LOC107551587,LOC107746009,LOC107702362,LOC107591534 coding upstream 239584 11636160 ~ 11642208 (-)
kitb kitb,LOC107754153,LOC107656054,LOC107746005,LOC107702363,LOC107591536 coding upstream 258328 11654904 ~ 11666734 (-)
G2532 NA non-coding downstream 196926 11198578 ~ 11198808 (-)
LOC122347981 NA non-coding downstream 388830 11004773 ~ 11006904 (-)
G2391 NA non-coding downstream 396649 10998334 ~ 10999085 (-)
G2381 cpe,LOC107548348,LOC107745061,LOC107591555,LOC107750458 non-coding downstream 529686 10861565 ~ 10866048 (-)
G2377 NA non-coding downstream 556432 10837968 ~ 10839302 (-)
G2630 NA non-coding upstream 315397 11711973 ~ 11712523 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding upstream 316868 11713444 ~ 11715227 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding upstream 319557 11716133 ~ 11716935 (-)
G2634 fbxo10,LOC107754157,LOC107656048,LOC107702368,LOC107591540,LOC107750413,LOC101884743 non-coding upstream 323152 11719728 ~ 11720175 (-)
G2635 fbxo10,LOC107656048,LOC107754157,LOC107702368,LOC107591540 non-coding upstream 323725 11720301 ~ 11721030 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other downstream 102686 11242031 ~ 11293048 (-)
G2401 NA other downstream 341793 11053154 ~ 11053941 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other downstream 414368 10953875 ~ 10981366 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other downstream 581659 10806569 ~ 10814075 (-)
LOC122347930 dnah6,LOC106610484 other downstream 596125 10734970 ~ 10799609 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other upstream 10989 11407565 ~ 11411713 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other upstream 113863 11510439 ~ 11512833 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other upstream 117575 11514151 ~ 11580717 (-)
apela NA other upstream 387053 11783629 ~ 11788666 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other upstream 701334 12097910 ~ 12117383 (-)

Expression


Co-expression Network