fbxo10 (fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413)


Basic Information

Item Value
gene id fbxo10
gene name fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11711940 ~ 11724900 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3804
taaattagtaaGTGTAATCAGGAGAGCTAGTGCAGAGgaaagttttgaaaatatattggAATTTCCACCATGCCAAATGTGatacgttgtttttttttctttccctttcttttttcctgacTACAGTGTAATAGAATCCACAGTGGCTTGCGTTCCGGGATTGTTGTCCTAGGCAACGGGAGAGGTTCTATACGCAGTAACCAGATCTATGGCAACAAGGAAGCTGGCGTGTATATTCTTTTTAATGGCAATCCTGTTGTCAGTGGAAAtcacattttccagggcctcgCAGCAGGCATAGCTGTCAATGAGAACGGAAGAGGACTTATCACTGAGAATGTTATAAGGCAGAACCAGTGGGGCGGTGCTGATATCCGTCGAGGAGGAGATCCAGTTCTTCGCAATAACTTCATCTGTTACGGTTACTCAGACGGAGTGGTggtgggagagagagggaggggccTCATTGAGGGCAACCATATATACGG
>XM_043247878.1
CTAGTGGAGTAAATTTAGGTCAGCGTTCGGCTGCGGAAATCTTGACGTGTAGATgaattgaaaaatacatttttacactaATCATGTAAAAGCCCCTTGCGAGACTAATACAGTTTATAAACGAATAATTAAACGTGGGCTGTTCAAGAGGGCAGTGTATGCAGTGAGTCTGACCACAAGACACTTTTCTGCGAGATGAGCGTCGCGTGATGTTGATCATCAGACGATGCGCGCGCCTCCGAGAGAGGCGAAGAAAGGGGCCGAAAGCTTAATATCACGTGTATCGGTGCACAGTAAAAGCCATGTTGCTTAACAACTGTGTCAGACAAGAGGGAAAAGTTGTCGTAGAAAAGCATTCCCCGCCTCCTGAATGAAAATACGCGAGCCCTATTTTCCACGCCTTCAAACACAAGGAAAATACCGAGAAATacgagattttttttttaccggaTGGGTGTTTGGTTTCTGATCGTAACCCAAGAGGAAAACGGTCGTGATGAGCTTTACGCCTGATAAAACGCTAGCTGAGCTGAACACAGTGTTGTCAGAGGTGATCTGCCCAGGTGAGGTGGCGTGGTGCTGACAGATATGGAGGTGGGAAGTCTGCCTGTCGAGCTCTGGCGCCTCATCCTGGCGTACCTGCCTCTGCCAGATCTGGGTCGATGCTGTCTGGTGTGCAGAGCCTGGCGGGAGCTCATTCTGAGTTTGGACAGCACACGTTGGCGCCAACTCTGTCTAGGATGCCCTGAGTGTCGTCACCCAAATTGGCCCCGTCGGCCCCACCTGCCCCCGGTTTCCTGGAGAGAGGCTCTCCGTCAGCATGCTCTTGCCAGCCGCACCTGGACCCAGAACGGCTCGGACCTCCACTCGTCTGCCTGCCTCCATCTTTTCCGCCGGAGGAAAGACCGCAGGGTTTGGCATGTGGGGACAGTAGCGGGAGGCGGTTATGAGACTCTTAGGGGAGCGCTGGCTGCGGCAGGGCCGTACGATAAGGTGGTGCTCCACGCGGGTGTGTATGAGGAACAGGTGGAGGTGTCCCTGAAGGTGCCTGTGGAGATTGTTGATGGGCAATTTGGGGATGTGTCGTTGCTGGTTAGCTTTGATCAACAGTGCCCAACAGCGAGGCTGTGCAATCTGGTGTTCATGCCGGCGTGGTTTTCACCCGTGGTTTATAAGaCGTCTTCTGGTCATGTCCAGTTGGACAACTGTAACTTTGAGGGCTGTCAACTGCACATCCGGGGTCCAGGGACGTGTCAGGCTCGTTTCTGCTCCTTTGCCCAGGGCAGCTCAGCCCATTTTCTAGGAGTGGCCATCAGTCTAATGGACAGCTGTGAGTTCTCAGGGGGAGATTCTGCCTCTGTCACTGTGGAAGGTGCTCCAGTCTCTGAACGCAACTGGGCCTTCAAACACCTGATTGCCTTGGCCAAGACCTTCACCATGATGACTAGTAATGCGTCAGCTGAAATATCTAATCAGAGCGGGAAAGACAGTGTGGGTGCTGGAAGTCATGTAAACACACCCTTGGAAGGAGTTAACACAATGGAAGGCTGGAATAAACAGGAAGTAGATTGGGAAGCAAACTGGGCAAAACAGAAAGGTGGAGATAGCCTTCTTCCAAGTCAGGATGGTACAATGATTGAGGAGGATGGCATGGAAACGTCGAGTGAGTCAAGTGAGGAAGATGATGTGCAAGACGGTGAGAAAGAGCACGTCTTAAAACTTTCATATGATCAGCACGGACTGGCACATCTCACCAAAGCAGATACGCCCGATTCTTCTGCATTTCCTGCGCTGTTGAGTCTGTCTGCAGAACTGCAGAGGGATGCAGAGGCACGGGACTTGGTTGCATCGGTTCAAGGCTGCCTGCTGCGGCGATGTCTGCTGCGTGATGGAAAAGGTGGCGTGCACCTGTGCAATCACGGTCAAGCTCGACTGGAGGCCAACGTGTTCAGAGGGCTCAACTATGCAGTGCGCTGCATCCAGAATGCCAAAATGGTGATGTTGCGTAATGAAGTGTGTGGGTGCAAGGCGTCTGGTGTGTTCCTGCGACTCTCTGCTCAAGGTCTCATTGCTGAAAACAACATTCATTCCAATGGGGAAGCTGGTCTAGACATCCGCAAAGGGGCTAATCCTATTATACTGTGTAATAGAATCCACAGTGGCTTGCGTTCCGGGATTGTTGTCCTAGGCAACGGGAGAGGTTCTATACGCAGTAACCAGATCTATGGCAACAAGGAAGCTGGCGTGTATATTCTTTTTAATGGCAATCCTGTTGTCAGTGGAAAtcacattttccagggcctcgCAGCAGGCATAGCTGTCAATGAGAACGGAAGAGGACTTATCACTGAGAATGTTATAAGGCAGAACCAGTGGGGCGGTGCTGATATCCGTCGAGGAGGAGATCCAGTTCTTCGCAATAACTTCATCTGTTACGGTTACTCAGACGGAGTGGTggtgggagagagagggaggggccTCATTGAGGGCAACCATATATACGGGAACAGAGGCTGTGGGGTATGGGTAATGTCATCTAGTCTACCTCAGCTCATTGGAAACCATATTACCCATAACCGCATGTATGGGCTAGCCGTGTTCTGCCGGAAGGACACAGAGTCTGCTGTGAGCCGAGAGGGCTATCGCTCATtacaggaaagagagagaggagtcgGGGTTGGAGAGAGGGACAGAGGAGCTCCAGAGAACTTCAATGAGGAAGGAGAACTGATGGCATGGGAAAGCGACATCGATAGCGAAGATGAGCGCTTTTCTTCTCGCCGGCCAATCACAGTTGCCCTTGTGGAAAACAACTGCATTAGCCACAACGGagCTGTTGGAGTGTATGTGAAGAGCAGTGAGCCTCTGAACGTGGTGGCAAACATGGTGAACAGTAACAGAGGAGATGGTGTGTCTGTCATTCAGAGCGCTCAGCTGACACGTTTAGTTGGAAACTGTGTCCTCTGTAATGGCTGGACAGGAGTGGCTGTGGACAGAGAGTGTCGAGTTGAGCTGCGTGGCAATGGGGTTTATGGCAATAACTGTCACGGAGTCTGCTTCCGAGGCGATGGGCTGATTGTGGAAAATGATGTGGTCGGAAATAATGCTGTTGGAATACGAGTGATTGACAATGCAGATGTTAAAGTATTGAGGAATCGTGTTCAGGCGTTGCGAGGTTATGGGATTTCTGTAAAGGAGCGGGTCCGAGGTGTGATTCAGGAGAACCTGGTTTATCAGAGCCACCCTACAAGTACTAAAGCTCCCATAtggacaaacaaacagaaccTGGAGTGTGTTGTACTTAACAACTCTCTGCTCACACCCAGATCACAAGCACTTTGGGCCTTGGATAATCCACCTCCTCGTCCCCACAATAATAACCCTTCTAGTGTCACCCCCTCCACACTTCCTGCTCACCTTGCCATCACCATGACAAACAGAATCACTGCCTCTGTAGAAAGTGGTTGCCATAACAACGGCAGTATCTTTTGCTCAATTTTATGAGGTACATATTTCCTGGCTTTGTAGCTCCACAACATCGGATGGATATTCCTACAATGTTCCCTCAATGTGAACCCTGGGTGAAGGAGGTGATGGCACTGCTTCAGTGTTGGATGAAGACTCAAGCACATGACATTCAAATGatcaaaaagcactttaataCAATTAACCAAAGGTAGGTTGCTTAGTAGTCCGATAATCAAAGGAATTTAAAGGATTAAGACCATCTTTCTGATATACTTGGATCTGAAATGAATCAGTCCACTCTCTCTAAATTGATCAGTGTTTAAAAGCAACGTACTGGAGTTTGGATTTGATCATGTACATGAAGCCTGGCTGGTTAACAATCCAGCTGAAAGCACATTCAGTACAGGACACTTTTCTGCTGGAAGCAGATCCCTTCAAATCAAGCATCTATTTACCATGAATTAGTAAAATACGTGGATTTAATTGTCCAGTGGTCCTACAGCCTGTTATTATCCTTTTAGACATTCACACACAGTCAGGAGGGAGAAAGAGACACAAGGGAAGTTGAAGTGAGAGACATGTCACGTGGCTTACTCTCTCTTCCCAAAAGACCAGATCTAGTGCTCAAAATAGAAGATAAACAAATTCAGTGCACATTGGGAATTGCAGTCCTGCTGGCTTCAGCTGAGGTTCTGTAAtggacaacaacaaaacagtatGCATTGGGTACCACGATGAAGCCAATCACGAGTCGAGGGAATATTCAGCTTTTTcctataaaaacactttattttatttttttatttacatgtgagCATTATTGAAGGGCGAAACCGAAAGCTACCGAATGGAAAGATTGAAAGACTTTGCaggaaattttgaaaaaaactattcaaaggGGATAGTCTAACCTAAATATGAAATTGTTGTCATCGTTTACTCTATCCTCATAACcacatgtcatttcaaaccagtaTGGCTTTTTTATATGATGAAACTTAGAAGACTACTAGTAATTAAATAGCTTTGGTTCCcactgactttcactgtatggagaacaacatgagagtggGTAAATGATAAcacaattttactttttgtgaacagtccctttaaatgtgattttaaggGCGCTGATTCAATAGGCCTATCgatgaatcatttatttgaactgtAAAGAGTTGGAATTACATGATTCCACAACGTTCAATCATGTAAAGGAAACATTTAGATATGCAATGGCCACTATGGTAGCCGTTTTATCATTTTGGAGACTGGAAGCAATCATAAATTAAAGCTAGACTTGATTTGAGTGTTGTTTGAATGTCAGTAAACCTTAgtactaataaaataacaagaaaCTAATGATAAATTCTAACTTCAATCAGTCCGTTATCCTAAAGTAGTCACAGGGCCTAAAAGTGATTGGATTCCTTAAGAGACCATGGCTATGTTCAGAATGGAATACTAATTTATTTACTAAACTTTGCAAAGTATATGCTTTAAATTGTcggttattttttaaagatgatatAAAAGTAGGTATAATTCTGAATCCACAAACACTCATTGACCTCATTGAATACGAGTGGCGAGAAGTTGTTGACTTTGCCAAATGTAgacatttttacacacaaaatattttttagtccAAACAAATAAGATACTGTCATTTCTGTTATTTGATTGTACTGGAACTTTAGAAGTTATTGCATGCAAATGTCGGATGATTTGGTATCGTGAACATTTGCGCACTATGCATAGTGTACATTACTGCAGGAATAGTATGCCATTAAGAACATAGACCATCGCTAAAACAATGGGTCTTGTAATGTGATTTAGTCCCAGAACACTAGACCTTATTTATCAAAAAGTAGCCATCTTCTGTTAGATTTACAGCAGgctgttatttttgtaatgttctcATACCACTGCTGGTTTGATTTGTAAAGTGCAATATGTATCTACATTAATGTGCCTATTTTTACAGTATGGTTTTTATACTTCTTGTGCAGTATAAATATAATGGCTGTCATAGCAAA

Function

symbol description
fbxo10 Predicted to be involved in protein ubiquitination; regulation of apoptotic process; and ubiquitin-dependent protein catabolic process. Orthologous to human FBXO10 (F-box protein 10).

NR:

description
PREDICTED: F-box only protein 10

GO: NA

KEGG:

id description
K10296 FBXO10; F-box protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
TU3804 False 488 lncRNA 0.45 3 11718596 11719376
XM_043247878.1 True 5510 mRNA 0.45 13 11711940 11724900

Neighbor

gene id symbol gene type direction distance location
smc2 smc2,LOC107656012,LOC107702366 coding upstream 18655 11684354 ~ 11693285 (+)
exoc1l si:dkey-245p14.4,LOC107591538,LOC107754188,LOC107551572,LOC107656282,LOC107746044,LOC107702277 coding upstream 28078 11682156 ~ 11683862 (+)
clrn2 clrn2,LOC107746045,LOC107702302,LOC107754181,LOC107551567,LOC107591582,LOC107656264 coding upstream 35153 11675000 ~ 11676787 (+)
clockb LOC107656111,LOC107591535,LOC107702364,LOC107754154 coding upstream 57366 11642519 ~ 11654574 (+)
tyrp1b tyrp1b,LOC107656198,LOC107551586,LOC107591533,LOC107702360 coding upstream 104742 11599279 ~ 11607198 (+)
LOC122352858 NA coding downstream 5058 11729958 ~ 11731028 (+)
LOC122342774 NA coding downstream 10479 11735379 ~ 11738204 (+)
LOC122342786 NA coding downstream 22517 11747417 ~ 11748349 (+)
LOC122345576 NA coding downstream 28608 11753508 ~ 11754416 (+)
LOC122342793 NA coding downstream 40538 11765438 ~ 11768427 (+)
G2518 NA non-coding upstream 33490 11678083 ~ 11678450 (+)
G2512 NA non-coding upstream 76051 11635488 ~ 11635889 (+)
G2511 NA non-coding upstream 77780 11633926 ~ 11634160 (+)
G2472 NA non-coding upstream 326927 11383797 ~ 11385013 (+)
G2468 NA non-coding upstream 328553 11383031 ~ 11383387 (+)
G2623 NA non-coding downstream 14084 11738984 ~ 11745961 (+)
G2625 NA non-coding downstream 19976 11744876 ~ 11763334 (+)
G2645 NA non-coding downstream 44543 11769443 ~ 11770585 (+)
G2651 NA non-coding downstream 68661 11793561 ~ 11848012 (+)
G2648 NA non-coding downstream 123231 11848131 ~ 11849277 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 730584 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 1221856 10483640 ~ 10490084 (+)
G2253 NA other upstream 1313900 10397373 ~ 10398040 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other upstream 1376738 10256662 ~ 10335202 (+)
G2230 NA other upstream 1466362 10245157 ~ 10245578 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other downstream 49056 11773956 ~ 11783070 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other downstream 112706 11837606 ~ 11844060 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 919779 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 934362 12659262 ~ 12724458 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 1478159 13203059 ~ 13205716 (+)

Expression


Co-expression Network