G2635 (fbxo10,LOC107656048,LOC107754157,LOC107702368,LOC107591540)


Basic Information

Item Value
gene id G2635
gene name fbxo10,LOC107656048,LOC107754157,LOC107702368,LOC107591540
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11720301 ~ 11721030 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3827
aaattatttttattaataataataaatgtattctaagcatatatttttattgtagtaatactttattttatccTTACATTGGACAGAAATTCATTGCACAGTAATCATTTCTAACAGctaaagtattattaataataattaaaatatactataagAATACTCTAAGCAAGTATTTtgcattgtaataataattatagcaacaaattaagtaatattatataaacatattactaatataatacATGTGGTATTAAGAAAGGTCtattgatataatttttttaaatatatgtctaTTACTATTAACATGATTATTGTcaataattagaaataaaactattcaaaatctgtattttcagACACCGACACTGTAGCCTTTTACTTTTTCGAACATGTGACTGTAAAACTGAAGCATGCTCACTTTAACATCTGCATTGTCAATCACTCGTATTCCAACAGCATTATTTCCGACCACATCATTTTCCACAATCAGCCCATCGCCTCGGAAGCAGACTCCGTGACAGTTATTGCCATAAACCCCATTGCCACGCAGCTCAACTCGACACTCTCTGTCCACAGCCACTCCTGTCCAGCCATTACAGAGGACACAGTTTCCAACTAAACGTGTCAGCTGAGCGCTCTGAATGACAGACACACCATCTCCTCTGTTACTGTTCACCATGTTTGCCACCACGTTCAGAGGCTCACTGCTCTTCACATACACTCCAACAGc

Function

symbol description
fbxo10 Predicted to be involved in protein ubiquitination; regulation of apoptotic process; and ubiquitin-dependent protein catabolic process. Orthologous to human FBXO10 (F-box protein 10).

NR:

description
PREDICTED: F-box only protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3827 True 730 lncRNA 0.33 1 11720301 11721030

Neighbor

gene id symbol gene type direction distance location
ecpas kiaa0368,LOC107702367,LOC107551559,LOC107656759 coding downstream 9498 11693517 ~ 11710803 (-)
kitb kitb,LOC107754153,LOC107656054,LOC107746005,LOC107702363,LOC107591536 coding downstream 53567 11654904 ~ 11666734 (-)
lap3 lap3,LOC107754151,LOC107656223,LOC107551587,LOC107746009,LOC107702362,LOC107591534 coding downstream 78093 11636160 ~ 11642208 (-)
rbm47 rbm47,LOC107656158,LOC107754149,LOC107702361,LOC107746010 coding downstream 88658 11608561 ~ 11631643 (-)
trnai-aau NA coding downstream 221943 11498285 ~ 11498358 (-)
polr1e polr1e,LOC107754182,LOC107754175 coding upstream 4097 11725127 ~ 11729264 (-)
tma16 tma16,LOC107754160,LOC107551564,LOC107656272 coding upstream 95446 11816476 ~ 11818872 (-)
grhprb grhprb,LOC107702374,LOC107656243,LOC107754183,LOC107591546,LOC108444366 coding upstream 125977 11847007 ~ 11850655 (-)
LOC122351032 LOC107754184,LOC107551556,LOC107656104 coding upstream 189720 11910750 ~ 11918207 (-)
mettl14 mettl14,LOC107591585,LOC107754186 coding upstream 202090 11923120 ~ 11926822 (-)
G2634 fbxo10,LOC107754157,LOC107656048,LOC107702368,LOC107591540,LOC107750413,LOC101884743 non-coding downstream 126 11719728 ~ 11720175 (-)
G2632 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107754157,LOC107591540,LOC107702368,LOC107750413 non-coding downstream 3366 11716133 ~ 11716935 (-)
G2631 fbxo10,si:dkey-245p14.2,LOC107702368,LOC107591540,LOC107750413,LOC107656048,LOC107754157 non-coding downstream 5074 11713444 ~ 11715227 (-)
G2630 NA non-coding downstream 7778 11711973 ~ 11712523 (-)
G2532 NA non-coding downstream 521493 11198578 ~ 11198808 (-)
G2636 NA non-coding upstream 67 11721097 ~ 11721829 (-)
G2637 NA non-coding upstream 1751 11722781 ~ 11725044 (-)
LOC122352980 NA non-coding upstream 8666 11729696 ~ 11730661 (-)
LOC122352933 NA non-coding upstream 10166 11731196 ~ 11734694 (-)
G2640 NA non-coding upstream 23788 11744818 ~ 11757315 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 139584 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 207468 11510439 ~ 11512833 (-)
zgc:195282 zgc:195282,LOC107591529,LOC107702293,LOC107754142,LOC108413380,LOC107656338,LOC108260812 other downstream 308588 11407565 ~ 11411713 (-)
LOC122343263 NA other downstream 323725 11395734 ~ 11396576 (-)
klhl5 klhl5,LOC107565971,LOC107754136,LOC107746020,LOC107656383,LOC107702349,LOC108412945 other downstream 427253 11242031 ~ 11293048 (-)
apela NA other upstream 62599 11783629 ~ 11788666 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other upstream 376880 12097910 ~ 12117383 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other upstream 616932 12337962 ~ 12366108 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 1183169 12904199 ~ 12926482 (-)
smim18 NA other upstream 1248063 12969093 ~ 12973012 (-)

Expression


Co-expression Network