tmem192 (tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450)


Basic Information

Item Value
gene id tmem192
gene name tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 11773956 ~ 11783070 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU3842
TCCTCAACCCGGAAGTCTAATTTAGTAACGTTTGTCCGGGCGTTTAGCCTTAAATCTGGACGTTTTGTCTTTATGTGATGGGCAGGCAGGGTGATGGAGTCTGGGCGTACATCAGCTTATGGCAATAACACAAACGTAGATTTTACACAAAGCACTGACGATGACCCTCTTATTGATGGACCACTGGTTTCCCAAGATGCACTCGAGTCcgtgataaagagagagtttcagaaattacccactcattgggcagtgagtgtcatctcatttttacatatTTGTCCAGCATCACCATGGCACAGTGAGACGGAGAGGTTATCTggacttctacagactgacCCGCAGAATAAGAAACCTTCCACTGCTCATTCACTCTGCAGGTAATGCACTGATCTTGACTGTAATTGCTTCGTCTTCTCTGCTGGATGCAAACGTGAAGAATCTTTCTGTGTATCTTCTGTTGGCCGTCATCTGTCTGGAGCTACTGCTGTCCGTCATCTTCTTGCTTAGATATGCAGTACATGTGGTGAAGTTTAATAACAAGAAGCCACATCCTGATGTGACTGAAGAAGAACGATCTCATGGCTGCTCCAGCGAAGGACATACAGAGACTGGCTTCAGGGACGGCTCCAGTCTGGAGGATGTGGTGGAAAAGCAGGCGGACTTGATTGATTATCTGAAACAACACAACAGCGTTCTGAGCAGGAGGATCCTCGCGCTGACCGCTCAGCAGATCAGAGGCTGACACATGCAAACAGAGAGAGTGACTCAGGTCTGTTTGTGCGTATGATGTGGTTTGAAGCCTtgcgtgcgagtgtgtgtgagtgtgtgtgtgagcgcgtcTATCTTGACTGGCATCGGCAGGCATGGCTCACTGATCAGAAGGCTTTTGGTGGGAGACGAACCCTGGTAACCTCTCTAACGACGCTCTCGCGTTTCCATGACGACAAGTCTGAGAAGACAATGGCTGCAATTAGGAAGTCAAAAACCTGCCACAGAAATGTTCAGTAAAGATGCTCATTATGAGTTGAGGATAGCGAGATCTAATGAAACTTAAAGCTTTATAATGTAACTTGGCTTTTTTGTTCATGTCTATTGTTAAAGCTATAGTACTTTATTTGGTTTCTTTAGTGcatttattggtattttttCTTGTGGATCagtgctgtttttgtgtgtcagaAATATGTTAGaagtatgtatgtgtacatggCTGTTCTCAAATCATGATCTTTTTAGTCCTATGAAGATGTCTTGAACTACTGtgattttatgtataataat
>XM_043239864.1
GTAGGATTGGTAACGTCCTCAACCCGGAAGTCTAATTTAGTAACGTTTGTCCGGGCGTTTAGCCTTAAATCTGGACGTTTTGTCTTTATGTGATGGGCAGGCAGGGTGATGGAGTCTGGGCGTACATCAGCTTATGGCAATAACACAAACGTAGATTTTACACAAAGCACTGACGATGACCCTCTTATTGATGGACCACTGGTTTCCCAAGATGCACTCGAGTCcgtgataaagagagagtttcagaaattacccactcattgggcagtgagtgtcatctcatttttacatgtagtttatgtggttttgtgCATTGTAATCACAGTATTTTGCTGGATATCTGATGAGCACACTACTGAGTGCACTGCAGCACTGCAGGGCATCGACTCCAAGACTGTGATCCTACTGGGAAAAGTTGCACTCTGGGTGatggtttttatatatgatagatTTGTCCAGCATCACCATGGCACAGTGAGACGGAGAGGTTATCTggacttctacagactgacCCGCAGAATAAGAAACCTTCCACTGCTCATTCACTCTGCAGGTAATGCACTGATCTTGACTGTAATTGCTTCGTCTTCTCTGCTGGATGCAAACGTGAAGAATCTTTCTGTGTATCTTCTGTTGGCCGTCATCTGTCTGGAGCTACTGCTGTCCGTCATCTTCTTGCTTAGATATGCAGTACATGTGGTGAAGTTTAATAACAAGAAGCCACATCCTGATGTGACTGAAGAAGAACGATCTCATGGCTGCTCCAGCGAAGGACATACAGAGACTGGCTTCAGGGACGGCTCCAGTCTGGAGGATGTGGTGGAAAAGCAGGCGGACTTGATTGATTATCTGAAACAACACAACAGCGTTCTGAGCAGGAGGATCCTCGCGCTGACCGCTCAGCAGATCAGAGGCTGACACATGCAAACAGAGAGAGTGACTCAGGTCTGTTTGTGCGTATGATGTGGTTTGAAGCCTtgcgtgcgagtgtgtgtgagtgtgtgtgtgagcgcgtcTATCTTGACTGGCATCGGCAGGCATGGCTCACTGATCAGAAGGCTTTTGGTGGGAGACGAACCCTGGTAACCTCTCTAACGACGCTCTCGCGTTTCCATGACGACAAGTCTGAGAAGACAATGGCTGCAATTAGGAAGTCAAAAACCTGCCACAGAAATGTTCAGTAAAGATGCTCATTATGAGTTGAGGATAGCGAGATCTAATGAAACTTAAAGCTTTATAATGTAACTTGGCTTTTTTGTTCATGTCTATTGTTAAAGCTATAGTACTTTATTTGGTTTCTTTAGTGcatttattggtattttttCTTGTGGATCagtgctgtttttgtgtgtcagaAATATGTTAGaagtatgtatgtgtacatggCTGTTCTCAAATCATGATCTTTTTAGTCCTATGAAGATGTCTTGAACTACTGtgattttatgtataataatgtgaataaaattatcaaaacttttttggaataaaa

Function

symbol description
tmem192 Predicted to be located in endosome; lysosome; and membrane. Predicted to be integral component of membrane. Predicted to be active in late endosome and lysosomal membrane. Orthologous to human TMEM192 (transmembrane protein 192).

NR:

description
PREDICTED: transmembrane protein 192

GO:

id name namespace
GO:0005765 lysosomal membrane cellular_component
GO:0005770 late endosome cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3842 False 1284 lncRNA 0.37 6 11773971 11783035
XM_043239864.1 True 1492 mRNA 0.43 6 11773956 11783070

Neighbor

gene id symbol gene type direction distance location
LOC122342793 NA coding upstream 5529 11765438 ~ 11768427 (+)
LOC122345576 NA coding upstream 19540 11753508 ~ 11754416 (+)
LOC122342786 NA coding upstream 25607 11747417 ~ 11748349 (+)
LOC122342774 NA coding upstream 35752 11735379 ~ 11738204 (+)
LOC122352858 NA coding upstream 42928 11729958 ~ 11731028 (+)
march1 march1,LOC107754159,LOC107551579 coding downstream 16971 11800041 ~ 11816488 (+)
fnip2 si:ch211-42i9.8,LOC107754161,LOC107656063,LOC107750416,LOC107702372,LOC107591544 coding downstream 36186 11819256 ~ 11835702 (+)
uba6 si:dkey-82j4.2,LOC107656020,LOC107551577,LOC107702375,LOC107591547 coding downstream 69155 11852225 ~ 11865138 (+)
apbb2b apbb2,apbb2b,LOC107656070,LOC107551575 coding downstream 84235 11867305 ~ 11910014 (+)
prss12 prss12,LOC107551563,LOC107656290,LOC107754187,LOC107750419,LOC107591549,LOC107702379 coding downstream 144371 11927441 ~ 11958156 (+)
G2645 NA non-coding upstream 3371 11769443 ~ 11770585 (+)
G2625 NA non-coding upstream 10622 11744876 ~ 11763334 (+)
G2623 NA non-coding upstream 27995 11738984 ~ 11745961 (+)
G2518 NA non-coding upstream 95506 11678083 ~ 11678450 (+)
G2512 NA non-coding upstream 138067 11635488 ~ 11635889 (+)
G2651 NA non-coding downstream 10491 11793561 ~ 11848012 (+)
G2648 NA non-coding downstream 65061 11848131 ~ 11849277 (+)
G2711 NA non-coding downstream 137669 11920739 ~ 11922365 (+)
G2767 LOC107548350,LOC107745058 non-coding downstream 465428 12248498 ~ 12250778 (+)
G2782 NA non-coding downstream 507052 12290122 ~ 12290466 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other upstream 49056 11711940 ~ 11724900 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other upstream 792600 10844956 ~ 10981356 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other upstream 1283872 10483640 ~ 10490084 (+)
G2253 NA other upstream 1375916 10397373 ~ 10398040 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other upstream 1438754 10256662 ~ 10335202 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other downstream 54536 11837606 ~ 11844060 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other downstream 861609 12644679 ~ 12658507 (+)
dnah6 dnah6,LOC106610484 other downstream 876192 12659262 ~ 12724458 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other downstream 1419989 13203059 ~ 13205716 (+)
slit2 slit2,LOC107700301,LOC107695646 other downstream 1733138 13516208 ~ 13585981 (+)

Expression


Co-expression Network