G2837


Basic Information

Item Value
gene id G2837
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12426213 ~ 12442443 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU4112
aaagaactttaattaaactcaaagaagtacctttacaaaaacaaaccaggcagacagagacagaccaacaacaacaacaacaacaacaacaacaaaaaaaaagccaccaaaatggacaacacaacagcttataaagagaaagatgggcccattacaaattaaaagaaacactaaatcatcCCCAGAGAACCtaacccataaccaaacaacataaatagacaaccaaatataattaataaaatcagctacTTTTCCTTTCTTGCCCCCCCCGACCATCTCTCTGAATGGTATGTCCAGGGAGAACCATTCCCCCTTAAATTCCCAGTTTCCACCCGGACTCTTAATTTTCGTCACACCAGGAAGCTGCAGTACTTGGGCCTGACAATCGTCACCACACACCGCCGGTAAACTTAagccaaaatagaaacaaaggtaaataacagatacaaagcaactaatttgtgtgcactccaaatcagcaacgatgtatgttataaatgaaacctatggaaaataagattataaaccgtgtatgcttgtgattaacaaatgcaactgacaaacagttaaactaaaaccataaataaacatgatttacaaactgtgttgtgtgtgtgtgtgtgtgtaaaaggtgaTACAGGTATATTACCACTCATGTGTGGCCACCACTCGGGTCGTCACATTGACACTGAACATACACTGCCTGTTCACCACCTCGATTTAACGAAGCAAACAGGTGATATGATCTGGCATCGCTGCAGCTGCTCAGGTCTAGGTTCAACAATGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4112 True 789 lncRNA 0.39 3 12426213 12442443

Neighbor

gene id symbol gene type direction distance location
ncapd3 ncapd3,LOC107655906,LOC107709432,LOC107750432,LOC107702392 coding downstream 6933 12407369 ~ 12419280 (-)
wdr19 wdr19,LOC107591558,LOC107750430 coding downstream 19658 12390944 ~ 12406555 (-)
glrba glrba,LOC107702391,LOC107591559,LOC108443987,LOC107655919,LOC107548353 coding downstream 36496 12368875 ~ 12389717 (-)
tmem144a tmem144a,LOC107656881,LOC107548314,LOC107745069,LOC108443989 coding downstream 109022 12312334 ~ 12317191 (-)
npy1r npy1r,LOC107591578,LOC107548312,LOC107656908,LOC107702283 coding downstream 117504 12292229 ~ 12308709 (-)
adamtsl7 LOC107709448,LOC107750434,LOC107702297,LOC107570220 coding upstream 35075 12477518 ~ 12494325 (-)
zcchc7 LOC107709449,LOC107655886,LOC107548354 coding upstream 57328 12499771 ~ 12544141 (-)
melk melk,LOC107709443,LOC107702285,LOC107570222 coding upstream 165323 12607766 ~ 12617282 (-)
LOC122348170 frmpd1,LOC107709451,LOC107655878,LOC107548301,LOC107750435,LOC107702397,LOC107570223 coding upstream 176040 12618483 ~ 12643576 (-)
chrna8 LOC107709454,LOC107655813,LOC107548356,LOC107562618,LOC107702399,LOC108410819 coding upstream 282131 12724574 ~ 12772830 (-)
G2829 NA non-coding downstream 89454 12335352 ~ 12336759 (-)
G2826 NA non-coding downstream 136107 12289829 ~ 12290106 (-)
G2750 NA non-coding downstream 275497 12142906 ~ 12150716 (-)
G2742 prss12,LOC107551563,LOC107754187,LOC107656290,LOC107702379,LOC107591549,LOC107750419 non-coding downstream 497217 11927551 ~ 11928996 (-)
G2690 NA non-coding downstream 516203 11849622 ~ 11910010 (-)
G2841 NA non-coding upstream 11788 12454231 ~ 12454769 (-)
G2842 NA non-coding upstream 12911 12455354 ~ 12455572 (-)
G2882 NA non-coding upstream 107479 12549922 ~ 12550239 (-)
G2889 NA non-coding upstream 149998 12592441 ~ 12595294 (-)
G2891 NA non-coding upstream 175325 12617768 ~ 12618042 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 60105 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 308830 12097910 ~ 12117383 (-)
apela NA other downstream 637547 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 845496 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 913380 11510439 ~ 11512833 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 461756 12904199 ~ 12926482 (-)
smim18 NA other upstream 526650 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 712043 13154486 ~ 13159444 (-)
G3072 NA other upstream 848853 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 1387020 13829463 ~ 13842664 (-)

Expression


Co-expression Network